Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2591 ATGGAATGCGAAGGCAAAGGAAAAGGCAAATTGGCGAGGGTGGTGGGAGTGGGAAAacagtcttatcttttgaaATCGAAAATCGGAGAGGGTCCATTCTCCACCGTGTGGAGAGCGGAGCAGATACCAAGCGGTGAAGACGTGGCGGTGAAGCAGGTCCTCCTCTCCAAACTCAGTCCTCGCCTCAAGTCTTGTTTGGATTGCGAGATAAATTTCTTGTCCTCTGTTAACCACCCCAATATTGTTCGCCTTCTTCACTTATTCCAGGATGATGGGTGTGCATACCTGGTCCTGGAGTTTTGTGTTGGAGGGAATCTAGCTTCTTATATTCAAAGCCATGGGAGAGTTCAGCAACAAACGGCCAGAAAATTCATGCAGCAGCTTGGGTCTGGTCTAAAAGTATTGCATTCTCACGGCATCATTCACAGAGATTTGAAGCCAGAGAACATTTTGCTATCAAGCCATGAGGGTGATGCAGTGCTAAAGATAGctgattttggtctctcaagGTAG 513 0.4444 MECEGKGKGKLARVVGVGKQSYLLKSKIGEGPFSTVWRAEQIPSGEDVAVKQVLLSKLSPRLKSCLDCEINFLSSVNHPNIVRLLHLFQDDGCAYLVLEFCVGGNLASYIQSHGRVQQQTARKFMQQLGSGLKVLHSHGIIHRDLKPENILLSSHEGDAVLKIADFGLSR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2591 170 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 23 170 IPR045269 GO:0004674|GO:0006914
Ssu1g2591 170 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 23 170 - -
Ssu1g2591 170 Gene3D Transferase(Phosphotransferase) domain 1 17 170 - -
Ssu1g2591 170 ProSiteProfiles Protein kinase domain profile. 22 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g2591 170 SMART serkin_6 22 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g2591 170 SUPERFAMILY Protein kinase-like (PK-like) 21 170 IPR011009 -
Ssu1g2591 170 Pfam Protein kinase domain 24 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g2591 170 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2591 Ssu-Chr1 70819204 70821041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2591 17 169 CBL-interacting serine-threonine protein kinases AT5G35410 40.909 1.51e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Ssu1g2591 Pkinase 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2591 - - lja:Lj1g3v1289070.2 276.944