Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2590 ATGTGGAGGACTGTGCGCCCAGGTGAATATGCTGAGACAGTTTGTGGTTCTCCATTGTACATGGCTCCAGAAGTTCTCCAGTTCCAGAGATACGATGACAAGgCAGACATGTGGAGTGTTGGGGCCATTCTTTTTGAGCTTCTAAATGGCTACCCACCTTTTAATGGCAGAAATAATGTTCAGCTGTTGAGAAACATCAGATCCTGCACCTGTCTTCCGTTTGCTCAACTGATTCTTTCAGGATTGGATCCTGACTGTCTCAATATTTGTTCAAGGCTACTATGCTTAAATCCAGTGGAGCGCCTAtcatttgatgaattttattggCATAGCTTTctacaaagaaaattaatggGAACATGA 363 0.3967 MWRTVRPGEYAETVCGSPLYMAPEVLQFQRYDDKADMWSVGAILFELLNGYPPFNGRNNVQLLRNIRSCTCLPFAQLILSGLDPDCLNICSRLLCLNPVERLSFDEFYWHSFLQRKLMGT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2590 120 SUPERFAMILY Protein kinase-like (PK-like) 5 115 IPR011009 -
Ssu1g2590 120 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g2590 120 Pfam Protein kinase domain 7 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g2590 120 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 3 109 IPR045269 GO:0004674|GO:0006914
Ssu1g2590 120 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 3 109 - -
Ssu1g2590 120 SMART serkin_6 2 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g2590 120 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2590 Ssu-Chr1 70818509 70819107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2590 5 106 CBL-interacting serine-threonine protein kinases AT2G30360 37.864 2.72e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Ssu1g2590 Pkinase 3.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2590 - - gmx:100787409 239.965