Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2586 ATGGACCATTTTCTCCAAGTGAATGGTTCGTTGAAGAATCGACGTCTTCCATTACCAGATATTGTTCTTCCAAAATATGGAGCCTTCGAACATCGTTGTCTGATGTCAGAAGGTCCTGCTAGTACACGTATTAGATCCATTTTAATGGATCTTGGTGATGCCACTGAGCAGCCATTGACCACTTTATTGTATAATTCTGTTGATGATGCATTGCCTTCCCCGAGTGTTGAGATACGAAGGTTGAAGGACGGtgacatattttttctaaaaggtgaagaaaatgatgaaaactCGGTGTCATTAGTTCTCCGCATAGCTGATCAAAGCGGGCGGGCAAGAAATATCCATTTCATGTTCTACCTAGACAGTGATACTGCCATCTCAGTTTCAAGTGAAATGGTTGAGCAACTTGAACTTGCTGAGCAGAATGTTAAATTCATAGCAGAGTTGATTGATCTGTTATTGATAACTTTGGTTCCTGATTGGAAACCTTGTGTAGCAGTTGATCATTTAGTTTCTTGTGATGGTAAACTGACTCATCCGAGCCAACAGAAAAATTTGCAGGtagcaaaatataaacaaagctCAGAAGATTCTAGCCAAATTGTGGCTGAAGATATAGGTCCCTCAACCTCACCTGGAAGATCAGCAGAAAAGGAAAACCATGATGATAGTGTGATTTTTCACTACGTTTTGTCTCATGCAAGCATTGGTCTTCAAAGAGCAACAAGGATAGATGATTTGTGTTCTGAGATGTCATACACTTCTGCAATATCTGACTTCAATGATAAGAATTTTTCTGCAGTTTCGTTCATGTCTGCTAAATCAGGATTTACAGACTTTGACTTGCCTAAAGTTAATTGTCAATCCTCACTTGCATCTGAAATCGAGGCATCGTCTGATTATAGGAGTAAGTTTCCATGCGTGGAGAGCAATGGTACTATGAAATTCTTTAATTGTCCTATTAATGTTTCCTCCTTGTATGAACATGAGGATGAGTTGAGGATAGAGTTAGAGATGATTGAACAGCAGTATCAAGAGGCAATTAAAGATTTATCAAAAAGAAGATACCAGGCCATCACGGAGACCAGAAGGAGACTGTCACAAAATAATgcaatcataaaataa 1128 0.3715 MDHFLQVNGSLKNRRLPLPDIVLPKYGAFEHRCLMSEGPASTRIRSILMDLGDATEQPLTTLLYNSVDDALPSPSVEIRRLKDGDIFFLKGEENDENSVSLVLRIADQSGRARNIHFMFYLDSDTAISVSSEMVEQLELAEQNVKFIAELIDLLLITLVPDWKPCVAVDHLVSCDGKLTHPSQQKNLQVAKYKQSSEDSSQIVAEDIGPSTSPGRSAEKENHDDSVIFHYVLSHASIGLQRATRIDDLCSEMSYTSAISDFNDKNFSAVSFMSAKSGFTDFDLPKVNCQSSLASEIEASSDYRSKFPCVESNGTMKFFNCPINVSSLYEHEDELRIELEMIEQQYQEAIKDLSKRRYQAITETRRRLSQNNAIIK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2586 375 Gene3D - 97 201 - -
Ssu1g2586 375 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 371 - -
Ssu1g2586 375 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 1 371 - -
Ssu1g2586 375 Coils Coil 331 351 - -
Ssu1g2586 375 MobiDBLite consensus disorder prediction 197 219 - -
Ssu1g2586 375 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 99 152 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2586 Ssu-Chr1 70801394 70802611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2586 1 211 MAP Kinase Kinase Kinase AT1G49160 51.163 1.47e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2586 K08867 - gmx:121175054 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2839 5 74481098 74482987 Ssu1g2586 1 70801394 70802611 PCT