Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu1g2500 | ATGCAGGAGGACAACAAGAAGATGAAGGTGAAGAAAGGATTTCTCGCTGTTCAAGTGGGTTTAGAGGACGACGACGAAGGTGGCTCTTCCTCTCAGAGATTCGTCATCCCCATCTCCTACCTTTACCACCCTCTCTTCAAGCGCCTTCTCGACAAGGCTCGCGAGGTGTATGGCTACCACACCGATGGCCCCCTCAAGCTCCCGTGCTCCGTCGACGATTTTCTCCATCTCCGTTGGCGAATCGAGAAGGAGTCCACTCccgaccaccaccaccaccaccacacccACCATCGCCTTCCCCACGCTCTGCACTTCCACTCTTGTTAA | 327 | 0.4954 | MQEDNKKMKVKKGFLAVQVGLEDDDEGGSSSQRFVIPISYLYHPLFKRLLDKAREVYGYHTDGPLKLPCSVDDFLHLRWRIEKESTPDHHHHHHTHHRLPHALHFHSC | 108 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu1g2500 | 108 | PANTHER | SMALL AUXIN-UP RNA-RELATED | 8 | 97 | - | - | |
Ssu1g2500 | 108 | Pfam | Auxin responsive protein | 6 | 80 | IPR003676 | GO:0009733 | |
Ssu1g2500 | 108 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 8 | 97 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu1g2500 | Ssu-Chr1 | 69047976 | 69048302 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu1g2500 | 10 | 82 | Calmodulin-binding Proteins | AT3G43120 | 46.575 | 1.03e-13 | 61.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu1g2500 | K14488 | - | gmx:100809305 | 199.904 |