Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2477 ATGCCAAAGTATCAAGGTGAAGAAGAGACGAAAAAAGCACCAAAGGGGCAATTCGTTGTTTATGTCGGGGAAGAACTAAGAAGATTTACCTTACCACTATCTTACTTGAAGAACCCTATCTTCCAGCAGCTGTTGAAGAAATCCGCAGAGGAGTACGGATATAGTAACTCAAGAGGCATAGTCATTCCATGTGATGAATCAACCTTTGAAAGgtgGCCATTTGTTGCTGAGAACGTCAAAGCATTCCTTATTTACTATTATTCGTAA 267 0.3933 MPKYQGEEETKKAPKGQFVVYVGEELRRFTLPLSYLKNPIFQQLLKKSAEEYGYSNSRGIVIPCDESTFERWPFVAENVKAFLIYYYS 88
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2477 88 Pfam Auxin responsive protein 8 71 IPR003676 GO:0009733
Ssu1g2477 88 PANTHER INDOLE-3-ACETIC ACID-INDUCED PROTEIN ARG7-LIKE 3 71 - -
Ssu1g2477 88 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 71 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g2477 Ssu-Chr1 68564106 68564509 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2477 5 70 Calmodulin-binding Proteins AT5G20810 46.970 2.33e-16 68.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2477 K14488 - cic:CICLE_v10026926mg 102.064