Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2429 ATGAGGAGCGTGCTTTTGCTTGCAGAAAACCTTGGTACTCTAGTCGTCCACATACTTATGGATTCTGAGAATATAGTTCAGACCTCAGATGGTGCTCTACTCACGCGGGGTAACACTTTAAATATAGCACCCCTCACTCTTTCTTTTGTTAGTCCTCCTCTCCCCATTCGTGAAACCATGAAGTGGCCAACATGGAAGTCCAAGTCCAACACCATGGCAATGGCTGTGGTGTTGTTTCACCTGAGTTTTTCCTTGGAGGTGTTCTCTCACTCTTCTCATGCAGACAGAATTGCTGAGCTTCCTGGCCAACCCCACGTAGGCTTTCAACAGTTCTCGGGATATGTCACAGTGGATGACAAGAAACATAAGTctcttttttactattttgctGAGTCAGAAACTGATCCAGCTTCAAAGCCTCTTGTTCTGTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTGGGAGTGGGAGCATTCTCAGAAAATGGACCCTTTAGACCAAATGGAGAATTTCTGATTAAAAATGATTGTAGTTGGAACAAAGAGGCAAACATGCTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCCTATATGACAGTGAATGACGAGGCAACAGCCAGGGACAACCTTGTATTCCTGCAACGCTGGTTCAACAAGTTCCCCCAATACAGGAGCAGAGATTTGTTTCTAACTGGGGAAAGCTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAAATGAACACAAAGAACAAGATATTTAATCTGAAAGGCATTGCCTTGGGTAATCCAGTTCTAGAATATGCTACCGACTTCAATTCAAGAGCTGAGTTCTTCTGGTCCCATGGACTAATATCAGATTCAACCTACAACCTGTTCACCAGAGTGTGCAACTATTCTAGGTATGTGAGTGAGTACTATAGGGACTCAGTTTCACCTCTTTGTTCAAAGGTTATGGGCCAAGTGAGCAGAGAAACCAGTAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGCTATCACAATCCAAGGTTATTTGTCCCCAAACCCAAGAAGCAAATGAGAGCATAGATGTGTGTGTAGATGACAAGGTTACAAACTACTTAAACAGGAGAGATGTACAAGAGGCACTTCATGCAAAGCTTGTTGGAGTTCGCAAGTGGGATGTTTGCAGCAACATCCTGGCCTATGATATGCTCAACCTGGAAGTGCCTACACTCCCTGTTGTTGGATCACTGATAAAAGCCGGAGTTCGGGTCTTGATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGTACCTTAGTTCAGAAGTTGGCAAGGCAATTAGGACTGAATACAACAGTCCCTTATAGAGTATGGTTTGAAGGCCAGCAGGTTGGAGGGTGGACTCAAGTTAATGGCAATATCTTCTCTTTTGCCACCATTAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAACCTGAAAGATCACTTGTGCTATTCAAGTCATTCTTGGAAGGCAGGCCATTACCTGAGGCTTTCTGA 1587 0.4386 MRSVLLLAENLGTLVVHILMDSENIVQTSDGALLTRGNTLNIAPLTLSFVSPPLPIRETMKWPTWKSKSNTMAMAVVLFHLSFSLEVFSHSSHADRIAELPGQPHVGFQQFSGYVTVDDKKHKSLFYYFAESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNDCSWNKEANMLYLETPVGVGFSYAKGSSSYMTVNDEATARDNLVFLQRWFNKFPQYRSRDLFLTGESYAGHYVPQLAKLMIEMNTKNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNLFTRVCNYSRYVSEYYRDSVSPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKVICPQTQEANESIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNILAYDMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVNGNIFSFATIRGASHEAPFSQPERSLVLFKSFLEGRPLPEAF 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2429 528 SUPERFAMILY alpha/beta-Hydrolases 99 525 IPR029058 -
Ssu1g2429 528 Gene3D alpha/beta hydrolase 91 353 IPR029058 -
Ssu1g2429 528 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 89 526 IPR001563 GO:0004185|GO:0006508
Ssu1g2429 528 PANTHER CARBOXYPEPTIDASE 89 526 - -
Ssu1g2429 528 PRINTS Carboxypeptidase C serine protease (S10) family signature 224 249 IPR001563 GO:0004185|GO:0006508
Ssu1g2429 528 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 187 IPR001563 GO:0004185|GO:0006508
Ssu1g2429 528 PRINTS Carboxypeptidase C serine protease (S10) family signature 491 504 IPR001563 GO:0004185|GO:0006508
Ssu1g2429 528 PRINTS Carboxypeptidase C serine protease (S10) family signature 188 198 IPR001563 GO:0004185|GO:0006508
Ssu1g2429 528 Gene3D - 376 411 - -
Ssu1g2429 528 ProSitePatterns Serine carboxypeptidases, serine active site. 238 245 IPR018202 GO:0004185
Ssu1g2429 528 ProSitePatterns Serine carboxypeptidases, histidine active site. 491 508 IPR033124 GO:0004185
Ssu1g2429 528 Gene3D - 422 521 - -
Ssu1g2429 528 Pfam Serine carboxypeptidase 102 521 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2429 Ssu-Chr1 67709068 67715767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2429 384 524 Calmodulin-binding Proteins AT2G22960 29.078 1.90e-15 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2429 1 67709068 67715767 Ssu1g2429 1 67709068 67715767 ECH