Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2381 ATGGTTTCGGTGCATGAGAAACTGAAGGCCTTCGTGGGTCACAGATGGGTGGTGTTTGTGTGTGCGATGTGGGACATGTCATTTGCGGGCACGTCTTACATGTTTGGGAGCATATCGCCGGTGATAAAGAGCAGCATGGGTTTCAACCAGAAGCAGGTGGCTTTCTTGAGCGTGGCCAAGGATTTGGGGGATAACGTTGGTCTTCTTGCTGGCAAAATCAGCCAGGTTTCCCCCATTTGGGGTCTTATACTTGTTGGGGTCTTCCAGAACGTTGTTGGTTATGGCCTTGTTTGGCTAGTCGTCACGCACCAGTTTCCTGCTTTACCTTTGTGGCTGCTATGCATTCTAATCTTCGTGGGGCAAAATGGGTCAACATATTACAACACAGCCGCACTCGTTTCCTGCGTGCAAAGTTTCCCCGAGAGCAGAGGCCCCGTGGTGGGGATATTGAAGGGCTTTGTTGGCCTAAGCGGTGCAATTTGGACTCAAATAATAGCCATGATCAAACTCCCCGATCAGGCCTCTCTGATTTTCATCATAGCAGTTGGACCGGCAATGGTTTCATGCACCCTCATGTTTATCATAAGACCCGTTGAGAGCTATGGACAGTCTAGAGCCTCCGATGGTTCAGGTTTCATGTTTGTCTACAGCATTTGCCTTCTCTTGGCTGCTTATTTGATGGGAGTTTTGTTGCTGGAGAACATGCTGGATTTGGACCAAAGCACCATCACATTGTTTGCAGTTATTTTGATCATTCTCATATTGCTTCCGATTATAGTTCCTATTCTATTGGTTTTCTTCTCTGGACCCCAAAGTCCTGACCAGGAAGCCCTGTTGGAGCCACCAATGGTAGTAGCAACTAAGTCTAAGCACGTGGTTGGGGAGACTAGTACTAGTGCCAAACACGTTGAAAACGAGAAGAATCCTTCGAAGCTAGAGGTGCTTCCTCTGTCAGAAGGGCCAAGGGACGTCTTTCAGTTTCAAGCTAGACTTTGGCAAGCTGTTACCAAAGCTGTGAAGAAAATCAAGCGAAAAAATGGGCCCCATAGAGGAGAGGATTTCACCTTGTCACAGGCAATGGCCAAGGCTGATTTTTGGATCATGTTCTTCTCTCTAGTCATGGGCGCTGGATCGGGCTTGACAGTCATCAATAACATGGGTCAGATTTGTCAATCATTGGGAGACAACAATGTCAATGTTTATGTGTCGGTTATCAGCATATCCAACTTCCTTGGGCGTATTGGTGGCGGCTACTTCTCAGAGGTTATAGTAAGAAATTTTGGGTACCCGAGACTTGTTGCATTGGCAGTGATTCAGGCAATGATGTCTTTGGGACTTTCCTACTATGTGTTGGGCTTGGATGGACAAGTTTACGTGGTGGCCATATCTATCGGTTTTGGGTATGGTGCTCACTGGTCAATTGCGCTAGCAGCAGCTTCAGAGCTATTTGGCTTGAAGAACTTTGGGACTTTGTACAATTTTCTTACTATGGCTAATCCAGCCGGGTCTCTCTTTTTATCTGGATTTGTGGCAAGCACAATATACGACTATTACGCGGAGCAGCAAGCAAAGCACCGACTGCAAACTTATGGAGCCTCCAACTTGGCAATGCCTTATGTGACTGGAAATAATGACTTGCTTCTTTGCAAGGGAAACGTTTGCTTCTCCTTCACATTTGGAATATTAGCACTTGTTTGCTTATTTGCAGCTTCTTTGAGCTTGGTCACGGTTCATCGAACAAAGAGATTCTATGCCCAACTTTATGGGGACTCTCGAACTTGA 1782 0.4646 MVSVHEKLKAFVGHRWVVFVCAMWDMSFAGTSYMFGSISPVIKSSMGFNQKQVAFLSVAKDLGDNVGLLAGKISQVSPIWGLILVGVFQNVVGYGLVWLVVTHQFPALPLWLLCILIFVGQNGSTYYNTAALVSCVQSFPESRGPVVGILKGFVGLSGAIWTQIIAMIKLPDQASLIFIIAVGPAMVSCTLMFIIRPVESYGQSRASDGSGFMFVYSICLLLAAYLMGVLLLENMLDLDQSTITLFAVILIILILLPIIVPILLVFFSGPQSPDQEALLEPPMVVATKSKHVVGETSTSAKHVENEKNPSKLEVLPLSEGPRDVFQFQARLWQAVTKAVKKIKRKNGPHRGEDFTLSQAMAKADFWIMFFSLVMGAGSGLTVINNMGQICQSLGDNNVNVYVSVISISNFLGRIGGGYFSEVIVRNFGYPRLVALAVIQAMMSLGLSYYVLGLDGQVYVVAISIGFGYGAHWSIALAAASELFGLKNFGTLYNFLTMANPAGSLFLSGFVASTIYDYYAEQQAKHRLQTYGASNLAMPYVTGNNDLLLCKGNVCFSFTFGILALVCLFAASLSLVTVHRTKRFYAQLYGDSRT 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2381 593 Pfam Nodulin-like 15 262 IPR010658 -
Ssu1g2381 593 CDD MFS_Mch1p_like 14 570 - -
Ssu1g2381 593 Gene3D MFS general substrate transporter like domains 198 581 IPR036259 -
Ssu1g2381 593 SUPERFAMILY MFS general substrate transporter 14 583 IPR036259 -
Ssu1g2381 593 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 593 - -
Ssu1g2381 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2381 Ssu-Chr1 66317577 66321453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2381 3 593 Nodulin-like Gene Family AT5G14120 52.196 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2381 - - gmx:100784744 1003.05