Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2311 ATGAAGAATGGGAGCTTGCAAGATATGCTGACTAAGGTTGAAACGGGTGAGAGGGAATTGGATTGGTTGTCAAGGCACAAGATTGCGCTTGGTGTAGCTTCTGGCCTTGAATACCTTCACATGAGTCACAATCCACGCATATTTCATAGGGACCTCCACCCTGCCAACATTCTTCTCGATGATGATATGGAGACTCGCATCGCTGGTTTTGGGCTTGCAAAAGTAATGCCGGATTATGTGACTCACATCACAACTTCCCTTGTGGTTGGCACTGTGGGGTACATAGCTCCTGAGTATCATCAGATACTCAAGTTCACTGATAAGTGTGATATTTACAGCTTTGGGGTTATACTTGGTGTGTTGGTGATAGGAAAGCTTCCTTCCAATGAGTTTTTCCAAAAAACTAATGAAATGACCTTGGTCAAGTGGATGAGGAAGGTGATGACTTTGGAGAATCCGAAGGAGGCAATTGATGCAAAGCTTTTGGGGAATGGATTTGAGGATCAAATGCTCATGGTTTTGAAGATTGCCTGTTTTTGCACCAGGGATGATCCACAAGAGAGGCCTGATAGTAGGGATGTTAGGTGTATATTGTCACAGATCAAGCACTGA 612 0.4412 MKNGSLQDMLTKVETGERELDWLSRHKIALGVASGLEYLHMSHNPRIFHRDLHPANILLDDDMETRIAGFGLAKVMPDYVTHITTSLVVGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSNEFFQKTNEMTLVKWMRKVMTLENPKEAIDAKLLGNGFEDQMLMVLKIACFCTRDDPQERPDSRDVRCILSQIKH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2311 203 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g2311 203 PANTHER OS06G0288100 PROTEIN 1 201 - -
Ssu1g2311 203 SUPERFAMILY Protein kinase-like (PK-like) 1 198 IPR011009 -
Ssu1g2311 203 Pfam Protein kinase domain 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g2311 203 PANTHER OS01G0253100 PROTEIN 1 201 IPR045271 GO:0004714|GO:0006468
Ssu1g2311 203 Gene3D Transferase(Phosphotransferase) domain 1 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2311 Ssu-Chr1 65097209 65097820 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2311 1 203 Receptor kinase-like Gene Family AT2G31880 72.906 4.79e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Ssu1g2311 Pkinase 6.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2311 - - gmx:100788151 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2311 1 65097209 65097820 Ssu1g2311 1 65097209 65097820 ECH