Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2298 ATGGAAGCACTATCCCTTCCCATAAACTCTCTTATCAATCCCACTCCCAACCACATTTCTCTGAGTGCTACGTCTAATTATGCCTCACTCTCTTCCTTACAACTCAATCCTTCTTTCACAGCCAGACCCCTCACTTTGAGGAAGAGCGTCGTTCGAGTCAAAACCGAGAGTGAGGATTACGAATTGAAGCAAATGAGGGACATGGCTGCTGCCAGAAAGAGATGGGAAGCTCTGATCAGAGATGGAAAAGTTAAAGTTCTTACCCCAAGGGAAGCTGGGTACGCTGTTCAACTTTCAAACAAGCCCCTTCTTGATGTCCGTCCCTCAAATGAACGCAAAAAGGCATGGGTGAGAGCTTCAACCTGGATTCCAATATTTGATGTTGATAATAAACTAGATTTTGGAACCATTCCCAGAAAAGTCACAAATTTTGTTATGGGAGGTTGGTGGAGTGGCATGCCTACACTGTCTTATGACAGTCAGTTCTTAGCCAAAGTTGAGGAGAAGTTCCCCAAAGATTCTGAATTAATTGTTGCATGCCAGAAGGGACTGAGATCACTTGCTGCTTGTGAACTACTGTGTAATGCTGGCTATACAAATCTGTTTTGGGTTCAAGGAGGATTTGAAGCTGCTGAAGAAGAGGATCTCATTGTAGAGGGCCCAGTGCCTCTCAAGTTTGCTGGAATTGGTGGCGTTTCAGAATTCCTTGGTTGGACTGATCAACAAAGAGCAGCTGCAGCCAAGGAAGGTTGGGGATATAGATTAGTGTTTTCTGCACGCCTGATTGGAGTATTTCTTGTTGCTGATGCACTATATATTGGTGCTCAGCAAATTGGGCGCTATCTTCAGGATATCAAGACCCATTGA 867 0.4452 MEALSLPINSLINPTPNHISLSATSNYASLSSLQLNPSFTARPLTLRKSVVRVKTESEDYELKQMRDMAAARKRWEALIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNERKKAWVRASTWIPIFDVDNKLDFGTIPRKVTNFVMGGWWSGMPTLSYDSQFLAKVEEKFPKDSELIVACQKGLRSLAACELLCNAGYTNLFWVQGGFEAAEEEDLIVEGPVPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLIGVFLVADALYIGAQQIGRYLQDIKTH 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2298 288 SMART rhod_4 87 217 IPR001763 -
Ssu1g2298 288 Pfam Rhodanese-like domain 93 210 IPR001763 -
Ssu1g2298 288 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 23 286 IPR044664 -
Ssu1g2298 288 Gene3D - 84 253 IPR036873 -
Ssu1g2298 288 CDD RHOD 103 210 - -
Ssu1g2298 288 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 82 216 IPR036873 -
Ssu1g2298 288 ProSiteProfiles Rhodanese domain profile. 97 219 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2298 1 288 Sulfurtransferasese or Rhodanese AT4G24750 64.726 1.02e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2298 - - gmx:100791331 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2298 1 64917158 64920863 Ssu1g2298 1 64917158 64920863 ECH