Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2297 ATGACTGTGCAATTCTTCTTTTCAGACACGCCATTTTGTTGCGAAGAATATGCGACAGACATGTTTACTGCAGGAACTGATACGACCTTCATAACTCTTGATTGGGCAATGACGGAGCTGCTAATCAATCCACAGGTTATGGAAAAAGCACAAAAGGAAGTTCGGAGCATCTTACGAGAGAGAAGAGTTGTTGCAGAGAGTGATCTGCATCAACTGGAGTACATGAGAGCTGTTATCAAAGAGATATTTCGATTGCATCCTGCAGTGCCAATATTACTCCCAAGAGAATCCATGGAAGGTGTTGTAATAGAGGGGTATAGAATTCTAGCTAAAAcaagatttttcaaattttcaaattccacTTATAGGAATACATATTTGATTAACAATGTTACACTAGTAATCTTAAATATAGAATCCCACATAAACGGTCTGTTGCTGCTGAGCGAAGGTTTTAGACCATTCTTGCTCTTTGTATCCATTTTCATAGTACTATTGATGAAATTCCTCTTTATAGACAAGCCAAGAAAGAGAAGGTCCAATCTCCCTCCAAGTCCTCCCGTCATACCCATCATTGGCAATCTTCACCATCTTGGCACCTCGCCCCACCTAGCTCTTCAAAGACTCACAGACAAGTATGGTCCCATAATTTTCCTACAACTTGGTCAAATCCCAACGGTGGTTGTTTCCTCAGCAAGACTAGCAAAGGAAGTGTTGAAAACCCATGATCTTCCACTTTCAAGCCGTCCACAACTCTTCTCAGCCAAATACCTCTTCTACAACTGCacaaatattgttttttctcCTTACGGTGCTTACTGGAGGTATATCAGGAAAATTTGCATACTTGAGCTTCTGAGTGCCAGAAGGGTTAACTCATACAGTTGTGTTAGAGAAGAAGAAGTTGCTCGTCTAGTTCGTAGGGTTGAAGGGTCTTATCCTGGAACTACCGATTTGTCCAAGATGCTGGGGCTGTATGCAAATGATGTCCTTTGCCGAGTAGCATTTGGAAGGGACTTTTCAGAAGAAGGAGACTATCATCGACATGGGTTCCAAAAGATGCTTGATGAGTATCAGGAACTCCTTGGAGGATTCAGTGTTGGTGACTTCTTTCCTTCCTTGGAGTTCATACACAGCTTGACGGGTATGAAGTCAAGACTCCAAGACACTTCTCGAAGATTTGATCAACTCTTTGATCGGATACTGAATGAACACATGGGTTCCAATAAAGTAGAGGAGCACAAGGACCTTGTAGATGTTTTGCTCGAGGTGCAGAAGAATGACTCGGATGAGATGCCTCTCACCACTGATAATATCAAGGCAATCATCTTGGACATGTTTGCTGCAGGAACTGATACAACCTTCATAACTCTTGATTGGGCAATGACAGAGCTGCTAATGAATCCACAGGTGATGGAAAAGGCACAAAAAGAAGTACGGAGCATCTTGGGAGAAAGAAGAGTTGTTGCAGAGAGTGATCTGCATCAATTGGAGTACATGAGAGCTGTTATCAAAGAGACATTTCGATTGCATCCTGCAGTTCCAGTATTAGTCCCAAGAGAATCGATGGAAGATGTTGTGATAGATGGGTATAGAATTCCAGCTAAAACAAGAATTTTTGTTAATGCTTGGGCAATAGGTAGGAACCCAGAAAGTTGGGAAGATCCCAATGCATTTAAACCAGAGAGGTTTTTAGGGAGTGATATTGACTACAAAGGGCAGGATTTTGAGCTATTACCGTTCGGGGCAGGTAGAAGAGGTTGTCCAGGTATTACTTTTGCTATTGCAGTTGTTGAGCTTGCTCTAGCTCAACTCCTCTACAGTTTTGATTGGGAGCTTCCTCCTGGTATTACACCCAAAGACTTGGATCTCACTGAAGTCTTTGGTATCTCAATGCACAGGAGAGAACATCTTCATGTGGTTGCTAAACCATACTTTCCGTGA 1944 0.4151 MTVQFFFSDTPFCCEEYATDMFTAGTDTTFITLDWAMTELLINPQVMEKAQKEVRSILRERRVVAESDLHQLEYMRAVIKEIFRLHPAVPILLPRESMEGVVIEGYRILAKTRFFKFSNSTYRNTYLINNVTLVILNIESHINGLLLLSEGFRPFLLFVSIFIVLLMKFLFIDKPRKRRSNLPPSPPVIPIIGNLHHLGTSPHLALQRLTDKYGPIIFLQLGQIPTVVVSSARLAKEVLKTHDLPLSSRPQLFSAKYLFYNCTNIVFSPYGAYWRYIRKICILELLSARRVNSYSCVREEEVARLVRRVEGSYPGTTDLSKMLGLYANDVLCRVAFGRDFSEEGDYHRHGFQKMLDEYQELLGGFSVGDFFPSLEFIHSLTGMKSRLQDTSRRFDQLFDRILNEHMGSNKVEEHKDLVDVLLEVQKNDSDEMPLTTDNIKAIILDMFAAGTDTTFITLDWAMTELLMNPQVMEKAQKEVRSILGERRVVAESDLHQLEYMRAVIKETFRLHPAVPVLVPRESMEDVVIDGYRIPAKTRIFVNAWAIGRNPESWEDPNAFKPERFLGSDIDYKGQDFELLPFGAGRRGCPGITFAIAVVELALAQLLYSFDWELPPGITPKDLDLTEVFGISMHRREHLHVVAKPYFP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2297 647 Pfam Cytochrome P450 183 635 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 Pfam Cytochrome P450 18 124 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 151 645 - -
Ssu1g2297 647 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 19 116 - -
Ssu1g2297 647 Gene3D Cytochrome P450 14 129 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS E-class P450 group I signature 458 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS E-class P450 group I signature 578 588 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS E-class P450 group I signature 234 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS E-class P450 group I signature 542 566 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS E-class P450 group I signature 438 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS E-class P450 group I signature 501 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS E-class P450 group I signature 588 611 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS E-class P450 group I signature 210 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS E-class P450 group I signature 326 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 Gene3D Cytochrome P450 170 645 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 SUPERFAMILY Cytochrome P450 17 124 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 581 590 IPR017972 GO:0005506|GO:0016705
Ssu1g2297 647 PRINTS P450 superfamily signature 579 588 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS P450 superfamily signature 502 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PRINTS P450 superfamily signature 24 41 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 SUPERFAMILY Cytochrome P450 183 644 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2297 647 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 19 116 - -
Ssu1g2297 647 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 151 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2297 Ssu-Chr1 64888170 64915747 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2297 157 646 Cytochrome P450 AT3G26300 43.030 5.89e-145 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2297 - - lang:109326078 827.78