Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2295 ATGGCTCTTCAACCATCATCATCACTTTTAAAGCAATTGCCAAATGAGCTAAATCCATCCCTTTCCTTGACCGTTTTCTTCTGCTTCGTAAGCCTCGTTTTAGTGCTGAATCAAACAAGAAGAAACAAGTCCAATTTGCCTCCTTCCCCACCAAAACTACCCATAATTGGCAATCTTCATCAACTGGGCACTCTACCACACCGCTCCTTCCAAGCACTCTCTCGCATGTATGGCCCTCTCATGCTGCTGCAATTAGGCCAAACTCCAACCCTTGTGGTTTCATCGGTTGATGTGGCCaaagaaatatacaaaactCATGATGTCGCTTTCTCCAACAAGCCTCAGACCACAGCCGTGAAAATCATCATGTATGGGTGCAAGGACGTGGCTTTTGCACCCTACGGCGAAGAGTGGAGACAGAAAAGGAAGATATGTGTTCTTGAGCTTCTAAGCATAAAAAGGGTGAGATCCTTTCAGTCCATTCGAGAAGAAGAAGTTGCAGCGATGCTTGATGCCATACGTGAAGTATGCGCAAGCAAAAGGTCCTCCGTGAATCTGAGTGAGATGCTGATTCAAACCTCGAACAACATAATGTCTAGATGTGTTCTTGGACGAAAGTATGATACAGCAGATGGTAGAATCAGCTTTGGAGAGCTAGGAAGGAAGATGATGAAACACTTAGCAACTTTCACCGTGGGAGATTTCTTTCCTTCGTTAGGTTGGATTGACTTTCTAACAGGACAAATACCAGAGTTTAAGGCCACTTTCTGTGCATTAGATGCTTTCTTTGAACAGTTAATTGCTGAACGCAAGAGAATTAAAAGGGACAATGGCCAACCTGATAACAAAGACTTTGTGGACATACTCCTTCAAATTCAAGAGAGTGGAAAGCATGATTTTCAGCTCACACATGATGATGTCAAGGCAATCCTAATGgACATATTTGCTGGAGGAAGTGACACTACTTCAACACTTCTGGAATGGGTATTTGCGGCGCTCTTAAAGAATCCCGCCACCATGAAGAAAGCCCAAGAAGAAGTAAGAAGAGTTGTGGGGTATAAATTACAAGTAgatgaaaatgatttaaatcaaatgaattatCTGAAATGTGTAGTCAAAGAAACTTTAAGATTATATCCACCTGCTCCTCTTCTGATACCTCGAGAAACTTTATCTGATGTGAAAGTCAATGGTTTTGATATTCCGTCCAAAACAAGAGTGTTTGTGAATGCATGGGCAATTCAGAGGGACCCTGAAATTTGGAACAGGCCGGAGGAGTTCCTTCCCGAGAGATTTGAAAAACAGCCAGAAGTTGATTTTAAAGGAAATGATTTGCAATTTATTCCCTTTGGTTCTGGGAGAAGGGGATGTATTGGAATTTCTTTTGCGCTTGCTTCCACTGAGTATATGCTTGCTAATCTCCTCTATTGGTTCGATTGGAAGCTTCCTGAGACTGGTGTACCTATACAAGACATAGACATGAGTGAGATATGGGGGCTCACTGTCATCAAGAAAGTACCGATTCATCTTCAACCTGAACTATACTCATTTGGATATAAACCTTGA 1566 0.4138 MALQPSSSLLKQLPNELNPSLSLTVFFCFVSLVLVLNQTRRNKSNLPPSPPKLPIIGNLHQLGTLPHRSFQALSRMYGPLMLLQLGQTPTLVVSSVDVAKEIYKTHDVAFSNKPQTTAVKIIMYGCKDVAFAPYGEEWRQKRKICVLELLSIKRVRSFQSIREEEVAAMLDAIREVCASKRSSVNLSEMLIQTSNNIMSRCVLGRKYDTADGRISFGELGRKMMKHLATFTVGDFFPSLGWIDFLTGQIPEFKATFCALDAFFEQLIAERKRIKRDNGQPDNKDFVDILLQIQESGKHDFQLTHDDVKAILMDIFAGGSDTTSTLLEWVFAALLKNPATMKKAQEEVRRVVGYKLQVDENDLNQMNYLKCVVKETLRLYPPAPLLIPRETLSDVKVNGFDIPSKTRVFVNAWAIQRDPEIWNRPEEFLPERFEKQPEVDFKGNDLQFIPFGSGRRGCIGISFALASTEYMLANLLYWFDWKLPETGVPIQDIDMSEIWGLTVIKKVPIHLQPELYSFGYKP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2295 521 Pfam Cytochrome P450 47 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PANTHER CYTOCHROME P450 71B11-RELATED 21 514 - -
Ssu1g2295 521 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 21 514 - -
Ssu1g2295 521 SUPERFAMILY Cytochrome P450 47 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Ssu1g2295 521 Gene3D Cytochrome P450 32 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2295 521 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2295 Ssu-Chr1 64810308 64812076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2295 38 509 Cytochrome P450 AT3G48310 44.093 7.56e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2295 K20617 - gmx:100792382 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2295 1 64810308 64812076 Ssu1g2295 1 64810308 64812076 ECH