Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2294 ATGGCACTTCCATCATCATCGCTGTTGCCGTATGAGCTAAGCTCAGCCCATTACGTAACTGTATTCTTCTGCTTCGTAAGCCTCCTGCTTATGCTAAAGCTAACAAGAAGAAACAAGTCTAATTTGCCTCCATCCCCACCAAAGCTACCAATAATTGGCAATCTTCATCAGCTAGGCACACTGCCACACCGCTCCTTCCAAGCACTCTCTCGCAAACGTGGCTTTTGCACCCTACGGCGAAGAGTGGAGACAGAAAGGAAGATAAGCGTTCTTGAGCTTCTAAGCATAAAGAGGGTGCGATCCTTTCAACCCATTCGAGAAGAAGAAGTTGCGGAATTGCTTGACACTTTACGTGAATCATGCGCTAGTAAAGTGTCATGCGTGAATCTGAGTGAGATGCTGATTGCAGCCTCAAACAACATAGTGTCTAGGTGTGTTCTTGGACGAAAGTATGATAGTCCTGATGGTAGTAGCAGCTTTGGGGAGCTAGGAAGGAAGATGATGAAACAATTAGCAACTTTAAGTGTGGGAGATTTCTTTCCTTCATTAGGTTGGGTTGACTTTCTAACGGGACAAATAGCAGAATTTAAGGCCACTTTTCTTGCATTAGATGCTTTCTTTGACCAGTTAATTGCAGAACGCAAGAGAATAAAAAGGAATGGTGACAGATCCCATCGAAATGACTTCATGGAGATACTCCTTCAAATTCATGAGGGTGGAAAGCATGATTTTCAACTCACCCATGATAACGTCAAAGCAATCTTAGTGgACATGTTTCTTGGAGGAAGTGACACTACTTCAACACTACTAGAATGGACATTTGCGGAGCTCATGAAGAATCCAAGTATCATGAAGAAAGCCCAAGTAGAAGTGAGAAAAGTTGTTGGATACAAATCAAAAGTAGATGAAAATGATGTGAGTCAAATGAACTACTTGAAATGTGTGATCAAAGAGACTTTGAGATTACATCCACCCGCTCCTCTGTTGATACCCCGAGAAACTTTATCCGATGTGAAAATCAAAGGTTTTGATATTCCGTCGGAAACAAGAGTATTTGTGAATGCATGGGCCATTCAGAGGGACCCTGAATTTTGGAACAGGCCTGAAGAGTTTGTTCCTGAGAGATTTGAAGAAGAGCCTGAAGTTGATTTTAAAGGACAGGATTTGCAATATATCCCCCTTGGTTCTGGGACAAGGGGATGTCTTGGAATTTCATTTGGGCTTGCTTCAACTGAGTATGTGCTCGCTAATCTCCTCTATTGGTTTGACTGGAAGCTACCTAACAATGGAGTCCCTATGCAAGATATAGACATGAGTGAGATACACGGGCTCACTGTCAGCGAGAAAGTACCGCTTCATCTTCAAACTACGTTACATTCTTTTGTATCTAAACCTTGA 1398 0.4242 MALPSSSLLPYELSSAHYVTVFFCFVSLLLMLKLTRRNKSNLPPSPPKLPIIGNLHQLGTLPHRSFQALSRKRGFCTLRRRVETERKISVLELLSIKRVRSFQPIREEEVAELLDTLRESCASKVSCVNLSEMLIAASNNIVSRCVLGRKYDSPDGSSSFGELGRKMMKQLATLSVGDFFPSLGWVDFLTGQIAEFKATFLALDAFFDQLIAERKRIKRNGDRSHRNDFMEILLQIHEGGKHDFQLTHDNVKAILVDMFLGGSDTTSTLLEWTFAELMKNPSIMKKAQVEVRKVVGYKSKVDENDVSQMNYLKCVIKETLRLHPPAPLLIPRETLSDVKIKGFDIPSETRVFVNAWAIQRDPEFWNRPEEFVPERFEEEPEVDFKGQDLQYIPLGSGTRGCLGISFGLASTEYVLANLLYWFDWKLPNNGVPMQDIDMSEIHGLTVSEKVPLHLQTTLHSFVSKP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2294 465 PANTHER CYTOCHROME P450 71B11-RELATED 13 74 - -
Ssu1g2294 465 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 74 - -
Ssu1g2294 465 SUPERFAMILY Cytochrome P450 36 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 Pfam Cytochrome P450 81 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS E-class P450 group I signature 313 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS E-class P450 group I signature 354 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS E-class P450 group I signature 250 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS E-class P450 group I signature 270 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS E-class P450 group I signature 137 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS E-class P450 group I signature 401 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS E-class P450 group I signature 391 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PANTHER CYTOCHROME P450 71B11-RELATED 85 456 - -
Ssu1g2294 465 PRINTS P450 superfamily signature 392 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS P450 superfamily signature 314 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS P450 superfamily signature 261 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PRINTS P450 superfamily signature 401 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2294 465 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 85 456 - -
Ssu1g2294 465 Gene3D Cytochrome P450 28 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2294 Ssu-Chr1 64797926 64800140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2294 15 458 Cytochrome P450 AT5G25120 38.277 1.72e-114 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2294 K20617 - mtr:MTR_3g076550 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2294 1 64797926 64800140 Ssu6g1450 6 23735214 23736986 PCT