Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2292 ATGACTCTTCTATCGTCGGTCCTAATGCATTTGCTGTATGAGCCAGTTTCATCCTTCTACTTTTCTGCTTTGTGCTTGATAAGCGTCCTGTTTGTGCTGAAGCTTGTAAGAAGAAACAAATACATTCTGCCTCCATCCCCACCAAAGCTACCCATAATTGGTAATCTTCATCAGCTAGGCACACTGCCACACCGCTCCTTCCAAGCACTCTCTCGCAAGTATGGTCCTCTCATGATGCTGCAATTGGGCCAAATTCCAACCCTTGTGGTCTCATCCGCTGACGTGGTCAGAGAAATAACCAAAACACATGATGTTGTTTTCTCCAACCGGCCACAACCTACGGCTGCTAAAATCTTTCTTTATGGATGCAAGGATGTGGGTTTTGCATCCTACGGCGACGAGTggagacaaatgaagaaggcCTGTGTCGTTGAGCTTCTGAGCCAGAAAAAGGTGCGGTCTTTTCGTTCCATTCGAGAAGAGGTTGTTGCGGAGTTGGTTGAAGCCATACGTGAAGCCTGTGCCGATGAAAGGTCGTGCGTGAATCTCACTGAGATGCTGATTGCAGCTTCAAACAACATTGTCTCTAGATGTGTAATTGGACGGAAGTGTGATGATACGCTGGGGGATGGTAGCAGTTGCAGCTTTGGCGTGTTAGGAAGGAAAATTATGAGACTATTCTCTGCTTTCAGCGTGGGTGATTTCTTCCCTTCGTTGAGTTGGGTTGACTTTCTAACTGGCCTAATTCCGGAAATGAAGGCCACTTTTGTTACAGTGGATGCCATCTTTGACGACGTAATAGCAGAACACGAGAGCAGAAACAGGAAGCACGATGAGTCCGACATTACGGACTTTGTGGGGATACTCCTTCAACTTCAAGATCGTGGGAGGCTTGACTTCGAGCTCAACCGACATAACCTCAAAGCAATCCTAAtgGACATGATAATCGGCGGAAGCGATACTACTTCAACGACTCTGGAATGGGCTTTTGCGGAGCTCCTTAGGAATCCAGACACCATGATGAAGGCCCAAGAAGAGGTAAGAAGAGTTGTGGGAATCAACTCGAGAGTGGATGAAAATTGTGTGAATAAAATGAACTACTTGAAATGTGTAGTCAAAGAAACTTTGAGATTACATCCACCCGTTCCTCTTCTGATTGCTCGAGAGACAACATCTGGTGTGAAACTAAGAGGGTACGATATTCCCCCCAAAACAAGGGTATTTATCAACGCATGGGCGATCCAGAGGGATCCTGAATTATGGGACAATCCTGAAGAGTTTTTTCCCGAAAGGTTTGAAAATAGCCAAATTGATCTAAATGGACAAGATTTTCAATTAATTCCGTTTGGCACTGGGAGAAGGGTATGTCCTGGAATTTCATTTGGGCTAGCTTCAACGGAGTATGTTCTTGCTAATCTTCTCTATTGGTTCAAATGGAAGATGCCAGAGACAGGTGCATTGATGCAGAACATTGACATGAGGGAGACGAGTGGACTCACAGTCAGCAAGAAAGCACCGCTTCATCTTGAACCAGAAACATATGACATGATCATGTGA 1557 0.447 MTLLSSVLMHLLYEPVSSFYFSALCLISVLFVLKLVRRNKYILPPSPPKLPIIGNLHQLGTLPHRSFQALSRKYGPLMMLQLGQIPTLVVSSADVVREITKTHDVVFSNRPQPTAAKIFLYGCKDVGFASYGDEWRQMKKACVVELLSQKKVRSFRSIREEVVAELVEAIREACADERSCVNLTEMLIAASNNIVSRCVIGRKCDDTLGDGSSCSFGVLGRKIMRLFSAFSVGDFFPSLSWVDFLTGLIPEMKATFVTVDAIFDDVIAEHESRNRKHDESDITDFVGILLQLQDRGRLDFELNRHNLKAILMDMIIGGSDTTSTTLEWAFAELLRNPDTMMKAQEEVRRVVGINSRVDENCVNKMNYLKCVVKETLRLHPPVPLLIARETTSGVKLRGYDIPPKTRVFINAWAIQRDPELWDNPEEFFPERFENSQIDLNGQDFQLIPFGTGRRVCPGISFGLASTEYVLANLLYWFKWKMPETGALMQNIDMRETSGLTVSKKAPLHLEPETYDMIM 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2292 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 513 - -
Ssu1g2292 518 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Ssu1g2292 518 SUPERFAMILY Cytochrome P450 44 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 Pfam Cytochrome P450 44 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2292 518 PANTHER CYTOCHROME P450 71B11-RELATED 15 513 - -
Ssu1g2292 518 Gene3D Cytochrome P450 31 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2292 Ssu-Chr1 64765135 64768287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2292 23 514 Cytochrome P450 AT3G48280 43.205 2.22e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2292 K20617 - gmx:100792382 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2292 1 64765135 64768287 Ssu1g2292 1 64765135 64768287 ECH
Ssu6g1443 6 23571408 23588333 Ssu1g2292 1 64765135 64768287 PCT