Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2172 atgatcttcAATTTTCTGTGTCAGGTCTCTACAACCCCGATGGAGGAAGGACAGATCCAGCATCAAGATAATGTGTCTCTCTTGCATCCCGCGTACCCTGTAACCCCTGAAGGAAGCTATATGAATGGATTTCCAATGATGCCCATGTATCCAAAGGATGTTGGTTCTGGAGTCATGTCAGTTGAAGCTGGGAATCCAATGGAAACACTCACTTTGGGACAAGGAAATGTGGAACAGAATGGGCCAAGTACTAAGCTAGTTTGTACTACCCCTATTGTTCCAGATCATAAAGGCTCCACAGTGTCTGATATCACTCCCAGTTTGAGTTCAGTTGATCCACCAGCACTGTCTCTCGGGTTATCTTTGTCAACTAGTCAAAGACAGACATCATCATCAAGACATTCAGCCTTACATGCACTGCCGCGCTTCAACCATGGAGAAAGCATCATAAGTGTTGCTTGA 462 0.4437 MIFNFLCQVSTTPMEEGQIQHQDNVSLLHPAYPVTPEGSYMNGFPMMPMYPKDVGSGVMSVEAGNPMETLTLGQGNVEQNGPSTKLVCTTPIVPDHKGSTVSDITPSLSSVDPPALSLGLSLSTSQRQTSSSRHSALHALPRFNHGESIISVA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2172 153 PANTHER KIN2 9 153 - -
Ssu1g2172 153 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 9 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2172 Ssu-Chr1 61933655 61934116 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2172 - - gmx:778056 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1318 6 21543943 21545465 Ssu1g2172 1 61933655 61934116 PCT