Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2163 ATGGCATACAAGAATCCAACCCTCACCGTTGAAAACAAAGAGGTTACATTCATCAAACCTTCAAGACCTACTCCTACCACCGTTCTTTCACTGTCCAGCATTGACAATGCCCCCGAGAACAATATCTTCATGCAAACCCTTCATGTATACCGATCGCCAAATCACAATTCCCCTAATACCACCAAACTCGATCCTGCAAATGTGATCAAAGAGGCCCTCTCCAAGGCATTGTTCTACTATTACCGTCTTGCAGGAAAGCTAGTAACACACGCAGATGGGAAACTCAGAGTCAACTGCAACTCCGAAGGAGTTCCATTCATAGAGGCTGCTTGTAATTGCGACCTCTCATCTCTCCATTACCTAGATGGCAACGACGTTGAAACAGCAAAACAATTTGCGGTCGATTTTCCCTTTCAAGATGAGTTTGGAAACCAATACCCTTTGGTTTTCAAGGTGACTAAATTTCTCTGTGGTGGTTTCACTATTGTAATGCGCAGGTCACACGCTATTTTCGACGGGACTGGGGCATCCCAGTTCTTAAAAGCCGTGGCAGAACTTGCAAGTGGAAAAACTGAGCCCTCTGTGAAACCTGTGTGGGAAAGGGAGAGACTAGTAGGCACAATCACTAGTCAACCCGTGCAAAACCCCATGGACAAGGCCACCGTTGCAGTTTCACCGTTTCTTCCTAGCACGGAGTTCTCGCACGTGTGCTCTAAGGTGGGGAGTGTGAGCATCGCAAGGCTCAAGATGAgtttgatgaaataa 765 0.4614 MAYKNPTLTVENKEVTFIKPSRPTPTTVLSLSSIDNAPENNIFMQTLHVYRSPNHNSPNTTKLDPANVIKEALSKALFYYYRLAGKLVTHADGKLRVNCNSEGVPFIEAACNCDLSSLHYLDGNDVETAKQFAVDFPFQDEFGNQYPLVFKVTKFLCGGFTIVMRRSHAIFDGTGASQFLKAVAELASGKTEPSVKPVWERERLVGTITSQPVQNPMDKATVAVSPFLPSTEFSHVCSKVGSVSIARLKMSLMK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2163 254 Gene3D - 5 217 IPR023213 -
Ssu1g2163 254 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 254 - -
Ssu1g2163 254 PANTHER ACYL TRANSFERASE 4 5 254 - -
Ssu1g2163 254 Pfam Transferase family 9 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2163 Ssu-Chr1 61558196 61558960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2163 8 212 Monolignol Biosynthesis Gene Families AT5G48930 27.404 2.59e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2163 K20240 - gmx:100783730 414.461