Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2113 ATgcttttaataatcaaaactgATGGGGAAGTTCAACAAAAAACCATTAGCGAAGTGTATGAGAAACTGAACCTACTTGAAGATGGAATGAAGAATTTTTTTGCAGAAGGCAAACCTAGCGTTGATCACAAAAACAGTACTGGACTTCTAGACATTATCTTTTTTACAATGTTTGACCCTTACAAGGTTCAGGAAGAAGTTCTTGGTATAAAGTTCATAGTGCCAGAGAAGTTTCCTGTGTTATTTTCTTGGTTGATGGCTATTCTTGAGCTCAATGTGGTGAAAGAGGCATCCCTTCCACATGATAAAGCAGTGGGAATTCTTCAGTTTATTAGTGCATTTACATCTTCTGCCTCAGCTTGA 363 0.3581 MLLIIKTDGEVQQKTISEVYEKLNLLEDGMKNFFAEGKPSVDHKNSTGLLDIIFFTMFDPYKVQEEVLGIKFIVPEKFPVLFSWLMAILELNVVKEASLPHDKAVGILQFISAFTSSASA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2113 120 SUPERFAMILY GST C-terminal domain-like 5 110 IPR036282 -
Ssu1g2113 120 Gene3D - 1 117 - -
Ssu1g2113 120 CDD GST_C_Tau 1 111 IPR045074 GO:0004364|GO:0006749
Ssu1g2113 120 PANTHER S-TRANSFERASE, PUTATIVE-RELATED 3 115 - -
Ssu1g2113 120 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 115 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2113 Ssu-Chr1 60405397 60405759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2113 4 114 Glutathione S-transferase Gene Family AT5G62480 41.228 2.71e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2113 K00799 - gmx:547581 137.887