Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2047 ATGTCTGGGTGGGTTGCTGGTTTCGCTACGATCGCAGCAGCGATCCTCGTATATCGTCTCATAAAGTTCATAACACGCCCTTCGCGACCACTCCCTCcgggtccaaaaccatggcccATAGTGGGAAACCTGCCGCACATGGGCCCAGTGCCGCACCACTCCCTGGCGGCCCTGGCCCGCATCCACGGCCCATTGATGCACCTCCGCCTCGGCTTCGTCGACGCGATTGTGGCCGCGTCGGCCTCCGCGGCGGAACAATTCTTGAAGATTCATGACTCTAATTTCAGCAGCCGGCCCCCCAACGCCGGCGCGAAATACATAGCTTACAACTACCAAGACCTCGTGTTTGCCCCCTATGGCCCGCGGTGGCGCTTGCTCCGGAAACTCACCTCCGTTCACCTGTTCTCCGGCAAGGCCATGGATGAATTTAAACACATGCGTCAGGCAGTTGGATTCACATCTGATCAATGA 471 0.5563 MSGWVAGFATIAAAILVYRLIKFITRPSRPLPPGPKPWPIVGNLPHMGPVPHHSLAALARIHGPLMHLRLGFVDAIVAASASAAEQFLKIHDSNFSSRPPNAGAKYIAYNYQDLVFAPYGPRWRLLRKLTSVHLFSGKAMDEFKHMRQAVGFTSDQ 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2047 156 PANTHER CYTOCHROME P450 FAMILY 1 13 148 - -
Ssu1g2047 156 Pfam Cytochrome P450 32 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2047 156 SUPERFAMILY Cytochrome P450 26 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2047 156 Gene3D Cytochrome P450 18 155 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2047 156 PANTHER CYTOCHROME P450 13 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2047 Ssu-Chr1 58090412 58091630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2047 8 148 Cytochrome P450 AT5G07990 64.384 3.63e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2047 K05280 - gmx:547475 255.758