Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2046 ATGTATGCACCACCTAATGCGTTGGCCAGGGTAGTGATTGGACGGCGAGTGTTCAACGACGGCAATGGTGGGTGTGATCCTAGAGCTGATGAGTTTAAGGCTATGGTGGTGGAGTTGATGGTGTTGGCAGGAGTTTTCAATATTGGTGACTTTATTCCTTCCTTGGAGTGGCTAGACCTTCAAGGGGTGCAAGCTAAGATGAAGAAATTACACAAAaggtttgattcatttttagCCAGCATTATTGAGGAGCACAATAGTTCTTCCAAGAGTGAGAAACACAAGGATTTGTTGAGTATCTTGTTGTCCCTAAAAGATGTAAAGGATGATGATGGAAACCAACTTACCAACACTGAGATTAAAGCACTGCTTCTGAACATGTTTACGGCTGGGACTGACACGTCATCAAGCACCACAGAATGGGCCATCGCAGAACTGATCCGAAACCCAAGAATTCTAGCCCAAGTCCAACAAGAGTTGGATACTGTTGTGGGTCGAGACAGGAGCGTGAAAGAAGAGGACTTGCCTCACCTCCAATACTTACAAGCTGTGATTAAGGAAACCTTCAGGCTCCACCCATCAACCCCTCTTTCTCTGCCACGTGTTGCAGCTGAGAGTTGTGAAATATTCGGCTACCACATTCCCAAGGGCGCCACGCTCTTGGTGAATGTTTGGGCCATAGCACGTGACCCAAAAGAGTGGGTTGACCCATTGGAATTCAAGCCTGAGAGGTTCCTACCAGGTGGTGAGAAGGCCGATGTTGATGTTAAGGGCAATGACTTTGAGGTTATACCCTTTGGTGCTGGACGAAGAATTTGTGCGGGCTTGAGCCTTGGACTTCGAATGGTTCAACTTCTAACCGCAACCTTGGTCCATTCCTTTGATTGGGAACTAGAAAATGGGCTGAACCTAGAAAAGCTGAACATGGACGAAGCATATGGGCTAACCCTACAAAGAGCCGTGCCTCTTTCAGTGCACCCCAAGCCTCGGCTCATGCCACATGTGTACTCAATGTCTTCCTAA 1023 0.4682 MYAPPNALARVVIGRRVFNDGNGGCDPRADEFKAMVVELMVLAGVFNIGDFIPSLEWLDLQGVQAKMKKLHKRFDSFLASIIEEHNSSSKSEKHKDLLSILLSLKDVKDDDGNQLTNTEIKALLLNMFTAGTDTSSSTTEWAIAELIRNPRILAQVQQELDTVVGRDRSVKEEDLPHLQYLQAVIKETFRLHPSTPLSLPRVAAESCEIFGYHIPKGATLLVNVWAIARDPKEWVDPLEFKPERFLPGGEKADVDVKGNDFEVIPFGAGRRICAGLSLGLRMVQLLTATLVHSFDWELENGLNLEKLNMDEAYGLTLQRAVPLSVHPKPRLMPHVYSMSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2046 340 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PRINTS E-class P450 group I signature 223 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PRINTS E-class P450 group I signature 3 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PRINTS E-class P450 group I signature 263 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PRINTS E-class P450 group I signature 273 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PRINTS E-class P450 group I signature 119 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PRINTS E-class P450 group I signature 139 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 SUPERFAMILY Cytochrome P450 12 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 Pfam Cytochrome P450 11 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PANTHER CYTOCHROME P450 71B11-RELATED 6 329 - -
Ssu1g2046 340 Gene3D Cytochrome P450 4 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PRINTS P450 superfamily signature 264 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PRINTS P450 superfamily signature 130 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PRINTS P450 superfamily signature 183 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2046 340 PANTHER FLAVONOID 3'-MONOOXYGENASE CYP75B4 6 329 - -
Ssu1g2046 340 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 266 275 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2046 Ssu-Chr1 58085381 58088102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2046 6 340 Cytochrome P450 AT5G07990 70.536 1.20e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2046 K05280 - gmx:547475 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2046 1 58085381 58088102 Ssu1g2046 1 58085381 58088102 ECH