Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2043 ATGTCTGGGTGGGTTGCTGCTTTCGCTACAATCGCAGCAGCGATCCTCGTATATCGTCTCATAAAGTTCATAACGCGCCCTTCGCGACCACTCCCTCcgggtccaaaaccatggcccATAGTGGGAAACCTGCCGCACATGGGCCCAGTGCCGCACCACTCCCTGGCGGCCCTGGCCCGCATCCACGGCCCGTTGATGCACCTCCGCCTCGGCTTCGTCGACGCGATTGTGGCCGCGTCGGCCTCCGCGGCGGAACAATTCTTGAAGATTCATGACTCTAATTTCAGCAGCCGGCCCCCCAACGCCGGCGCGAAATACATAGCTTATAACTACCAAGACCTCGTGTTTGCCCCCTATGGCCCGCGGTGGCGCTTGCTCCGGAAACTCACCTCCGTTCACCTGTTCTCCGGCAAGGCCATGGATGAATTTAAACACTTGCGTCAGGTGAATTTCTTTCCTATGTCCCCTGAATGCTATGCGTGTGTTCCTTTGCGTGAATACTGTCATTTTGTTTTTGGCTGCTTTGcggttttccttttattttattggacaGCACTGTCCTAG 564 0.5177 MSGWVAAFATIAAAILVYRLIKFITRPSRPLPPGPKPWPIVGNLPHMGPVPHHSLAALARIHGPLMHLRLGFVDAIVAASASAAEQFLKIHDSNFSSRPPNAGAKYIAYNYQDLVFAPYGPRWRLLRKLTSVHLFSGKAMDEFKHLRQVNFFPMSPECYACVPLREYCHFVFGCFAVFLLFYWTALS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2043 187 Pfam Cytochrome P450 32 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2043 187 SUPERFAMILY Cytochrome P450 26 148 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2043 187 PANTHER CYTOCHROME P450 FAMILY 1 12 169 - -
Ssu1g2043 187 PANTHER CYTOCHROME P450 12 169 - -
Ssu1g2043 187 Gene3D Cytochrome P450 18 160 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2043 Ssu-Chr1 58013785 58014348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2043 8 157 Cytochrome P450 AT5G07990 61.290 1.01e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2043 K05280 - gmx:547475 256.144