Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2011 ATGTCAggagcagcagcagcagcaacgCCGATTCTGAAGGACGAGGTGGACATAGTGATCCCAACGATAAGGAACCTGGACTTCTTGGAGAGGTGGAGGGCGTTCTTTGAGGGGTATCATCTGATAATAGTGCAGGACGGGGACCCTAAAAAAGTCATAAACGTCCCCGAAGGCTTCGACTACGAGCTCTACAACCGCCACGACATCAACCGAATTCTGGGCCCCAAAGCCAACTGCATTTCCTTGAATGACTCTGCTTGTCGCTGCTTCGGCTTCTTGGTCTCCAAGAAGAAGTACATCTTCACCATCGACGATGACTGCTTCgtTGCAAATGATCCATCTGGCAAAGAAATTAATGCCCTGGAGCAGCACCTTAAGAACCTTCTGACTCCATCAACCCCATTTTTTTTCAACACCCTCTATGATCCATACAGAGAGGGTACAGATTTTGTCCGTGGATACCCATTTAGTCTGCGTGGAGGCGTCCCAACAGCTGTTTCTCATGGCCTCTGGCTCAACATTCCTGATTATGATGCCCTAACTCAGCTTGTCAAGCCTCTAGAGAGAAACACTAGGTATGTAGATGCAGTTATGACTATACCAAAAGGAACTCTCTTCCCCATGTGTGGTATGAATTTGGCATTTAACCGTGAATTAATTGGTCCTGCAATGTACTTTGGACTCATGGGTGAGGGCCAACCTGTTGGACGCTATGATGATATGTGGGCTGGCTGGTGCATGAAGGTCATAAGTGATCATCTGGGAATGGGGGTGAAGACAGGTTTGCCTTACATCTGGCACAGCAAAGCTAGCAGTGCATTTGTGAACCTTAAGAAGGAGTACAAAGGAATTTACTGGCAAGAAGAGCTAATCCCATTTTTCCAATCTGTTTCTCTTCCAAAAGAATGCACAACTGCTCAGAAATGCTACATTGAACTCTCCAAGCAAGTTAAGGCAAAACTTGGCAAGGTTGATGAGTATTTCAACAAGCTTGCAGATGCCATGGTCACATGGATTGAAGCATGGGACGAACTACACCCATCTGAGGAAAAATCTGATGCACTGCCCAATGGTCCGGGCGAAGTAAATTCCTTGATCTACGTGGCTCTAGGGATATAA 1119 0.454 MSGAAAAATPILKDEVDIVIPTIRNLDFLERWRAFFEGYHLIIVQDGDPKKVINVPEGFDYELYNRHDINRILGPKANCISLNDSACRCFGFLVSKKKYIFTIDDDCFVANDPSGKEINALEQHLKNLLTPSTPFFFNTLYDPYREGTDFVRGYPFSLRGGVPTAVSHGLWLNIPDYDALTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGEGQPVGRYDDMWAGWCMKVISDHLGMGVKTGLPYIWHSKASSAFVNLKKEYKGIYWQEELIPFFQSVSLPKECTTAQKCYIELSKQVKAKLGKVDEYFNKLADAMVTWIEAWDELHPSEEKSDALPNGPGEVNSLIYVALGI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2011 372 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 4 352 - -
Ssu1g2011 372 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 248 IPR029044 -
Ssu1g2011 372 PIRSF UPTG 6 350 IPR004901 GO:0016866|GO:0071669
Ssu1g2011 372 Pfam Reversibly glycosylated polypeptide 12 346 IPR037595 -
Ssu1g2011 372 PANTHER UDP-ARABINOSE MUTASE 4 352 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2011 Ssu-Chr1 57050001 57052399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2011 K13379 - gmx:100778301 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g2188 8 57690552 57693052 Ssu1g2011 1 57050001 57052399 ECH
Ssu1g2011 1 57050001 57052399 Ssu1g2011 1 57050001 57052399 ECH