Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1932 ATGGAAGAATTTAAgattctttttgtctttctcaTGACTCTGATACTTGTGCTCAAGGTCGTAGTCTCGCTCTGGTGGAGACCAAGAAAAATTGAGGGACATTTCTCCAAGCAAGGAATCAGAGGACCCCCATATCGTTTCTTTATTGGAAATGTGAAAGAACTTGTTGGAATGATGATGAAAGCTTCCTCTCAACCTATGGCTTTCTCTCACAACATTCTCCCTAGAGTCCTTTCCTTCTACCATCACTGGAAGAAAATTTACGGCGCAACATTCCTTGTTTGGTTTGGACCCACTGCTCGAGTCACCATCTCTGATCCAGACCTCATCCGGGAAATCTTCACCTCCAAATCAgaattctatgagaaaaatgaaTCTCCCCCACTTGTGAAGCAGCTAGAAGGTGATGGACTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACCGAAGAATCATCTCTCCCACCTTTCATACGGAAAATCTCAAACTGTTGATACCGATGATGGCTGCAAGCGTGGTTGAGATGTTGGACAAGTGGAAGGCAATGGCCGAGAAGGGTGAGGATGAGGTGGAAATCGAAGTTTCAGAGTGGTTTCAAACCTTAACAGAAGATGTAATTACCAGGACAGCGTTTGGAAGCAGCTACGAAGATGGCAAAGCCGTTTTCCGGTTACAAGCACAACAAATGGTCCTAGCAGCTGATGCCTTCCAAAAAGTGTTCATTCCAGGTTATAGATTCTTCCCCACGAGGAGGAATATAAATTCTCGGAAATTGGACAAGGAAATCAAGAAATCGTTGGTGAAGCTCATCGATCGACGGAAAGAGAATGCGTGTGGGAATGAAGATAAGAAAGGGCACAAGGATTTGCTGGGGCTTATGATTCGGGCTTCTATCACCACCTCCAATGTGAATGTAACGGTAGATGACATTGTGGAAGAATGCAAGACCTTTTTCTTTGCAGGCAAACACACCACTTCCAACTTGCTTACGTGGACCACGATTCTGCTTGCGATGCACCCCCAGTGGCAGGTACGGGCACGTGAGGAGCTCCTGAGTGTGTGCGGAGCACGTGACGTTCCCACCAAGGACGATCTTGCCAAGCTTAAGACACTGACCATGATTGTGAACGAGTCTCTGAGACTGTACCCTCCCACAATCGCAACCATCAGAAGGGCAAAAGCTGACGTGGAGCTAGGGGGGTACAAGATCCCGTGCGGGACGGAGCTCCTGATTCCCATACTGGCCGTTCATCACGATCACGCCACGTGGGGCAGCGATGCGAGCGAGTTCAATCCTGGCCGTTTCTCCGACGGCGTGTCCCGCGCCGCGCACCACCCTTTCGCCTTCATTCCTTTCGGTCTCGGTGCGCGCACATGCATCGGACAGAACCTCGCGCTTCTCCAAACCAAACTCGCCCTCGCCATCATGCTTCGCCGTTTCAGTTTCAGGTTGGCCCCGACCTATCGCCACGCACCAACGGTCCTCATGCTGCTCTATCCCCAGTATGGCGCACCAATCCTTTTCCAACCCATATCCACAACCACTGTGGATTGA 1557 0.4881 MEEFKILFVFLMTLILVLKVVVSLWWRPRKIEGHFSKQGIRGPPYRFFIGNVKELVGMMMKASSQPMAFSHNILPRVLSFYHHWKKIYGATFLVWFGPTARVTISDPDLIREIFTSKSEFYEKNESPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHTENLKLLIPMMAASVVEMLDKWKAMAEKGEDEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAVFRLQAQQMVLAADAFQKVFIPGYRFFPTRRNINSRKLDKEIKKSLVKLIDRRKENACGNEDKKGHKDLLGLMIRASITTSNVNVTVDDIVEECKTFFFAGKHTTSNLLTWTTILLAMHPQWQVRAREELLSVCGARDVPTKDDLAKLKTLTMIVNESLRLYPPTIATIRRAKADVELGGYKIPCGTELLIPILAVHHDHATWGSDASEFNPGRFSDGVSRAAHHPFAFIPFGLGARTCIGQNLALLQTKLALAIMLRRFSFRLAPTYRHAPTVLMLLYPQYGAPILFQPISTTTVD 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1932 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Ssu1g1932 518 PANTHER CYTOCHROMEA2 7 507 - -
Ssu1g1932 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 507 - -
Ssu1g1932 518 Pfam Cytochrome P450 78 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 SUPERFAMILY Cytochrome P450 35 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1932 518 Gene3D Cytochrome P450 25 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1932 Ssu-Chr1 53812224 53816532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1932 5 514 Cytochrome P450 AT2G26710 73.981 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1932 K15639 - gmx:100786200 920.998