Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu1g1919 | ATGGATGGGAACAAGGACGACGCGTTGAAATGTTTGAGAATCGGCAAAGAGGCGTTAGAAAACGGCGATCGCTCACGCGCTCTGAAGTTCGTGACGAAAGCGCGCCGCCTCGACCCCGCCCTCCCCGTAGACGATCTATTGTCCGCGATAGAGACGGACGCAGGGGATCCGCCCCCTGCTGCCCCCGCCGCCGCGGAGCCCACGAAGCCCCCTGATCAGCCTTCTATCCGCCGAAGGGCCGCCACCGCGGCCCCCGCGGGGTCCTCATCGGCCTCATCCTCTCCGGCCACGTACACCGAAGAGCAAATTTCAATTATCAGAGAGATTAAGAGGAAGAAAAACTTTTATGATATATTGGGATTGGAGAAAAGCTGCACTGTTGAGGATGTGAGGAAATCTTATAGGAAACTGTCTCTTAAGGTTCATCCCGACAAGAACAAAGCCCCTGGCGCCGAGGAAGCCTTCAAGGCCGTGTCGAAGGCGTTTCAGTGTCTTAGTAATGAAGAAAGTAGGAGGAAGTATGACATTTCTGGAGAGGATGAATCGGTTTATGAGCAGCGCGCAGCGAGGCCGGCGACCAGGGGCTATAATGGTTACTATGAGGCTGATATTGATGCTGAGGAGATATTTAGGAACTTCTTCTTTGGAGGAATGGCCCCTGCCGCTAATTTTGGAGGATTCAGTTTTGGACCAGGTGGTTTTAATGCTCACAGGCCTGCTGAACATGGTTCTGGTGGTTTTAATGTTCGCGCCTTAATTCAGTTGCTGCCGGTGCTgcttattttgcttataaactTTTTGCCTTCGTCAGATCCCTTGTACTCACTTTCGAAGAGTTATCCTTATGAACATCGGTTTACTACACCCAAGGgtgttaattattatgttaagtCTACAAAGTTTGCTCAGGAGTATCCGCTGCAAAGCGAGGAACGAGTGGCGGTGGAAGAAAGGGTTGAGAGGGAGTACTTCAGCATTCTCCGCCAGAACTGTCGTTTCGAGTTGCAGCGTCGCCAATGGGGGTATATCCGGGAAACGCCGCACTGTGATATGCTGCGGAAGTTTGAGGTGGCAAATTGA | 1080 | 0.5056 | MDGNKDDALKCLRIGKEALENGDRSRALKFVTKARRLDPALPVDDLLSAIETDAGDPPPAAPAAAEPTKPPDQPSIRRRAATAAPAGSSSASSSPATYTEEQISIIREIKRKKNFYDILGLEKSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESRRKYDISGEDESVYEQRAARPATRGYNGYYEADIDAEEIFRNFFFGGMAPAANFGGFSFGPGGFNAHRPAEHGSGGFNVRALIQLLPVLLILLINFLPSSDPLYSLSKSYPYEHRFTTPKGVNYYVKSTKFAQEYPLQSEERVAVEERVEREYFSILRQNCRFELQRRQWGYIRETPHCDMLRKFEVAN | 359 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu1g1919 | 359 | PRINTS | DnaJ domain signature | 134 | 149 | IPR001623 | - | |
Ssu1g1919 | 359 | PRINTS | DnaJ domain signature | 150 | 170 | IPR001623 | - | |
Ssu1g1919 | 359 | PRINTS | DnaJ domain signature | 116 | 134 | IPR001623 | - | |
Ssu1g1919 | 359 | ProSiteProfiles | dnaJ domain profile. | 114 | 178 | IPR001623 | - | |
Ssu1g1919 | 359 | PANTHER | - | 1 | 358 | - | - | |
Ssu1g1919 | 359 | MobiDBLite | consensus disorder prediction | 85 | 100 | - | - | |
Ssu1g1919 | 359 | PANTHER | AT29763P-RELATED | 1 | 358 | - | - | |
Ssu1g1919 | 359 | Pfam | DnaJ domain | 114 | 175 | IPR001623 | - | |
Ssu1g1919 | 359 | Pfam | Domain of unknown function (DUF1977) | 268 | 339 | IPR015399 | - | |
Ssu1g1919 | 359 | Gene3D | DnaJ domain | 110 | 223 | IPR036869 | - | |
Ssu1g1919 | 359 | CDD | DnaJ | 114 | 167 | IPR001623 | - | |
Ssu1g1919 | 359 | SUPERFAMILY | Chaperone J-domain | 110 | 230 | IPR036869 | - | |
Ssu1g1919 | 359 | MobiDBLite | consensus disorder prediction | 48 | 100 | - | - | |
Ssu1g1919 | 359 | ProSitePatterns | Nt-dnaJ domain signature. | 155 | 174 | IPR018253 | - | |
Ssu1g1919 | 359 | SMART | dnaj_3 | 113 | 170 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu1g1919 | Ssu-Chr1 | 52776794 | 52777873 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu1g1919 | 109 | 175 | SUVH1 or 3-interacting DNAJ domain-containing protein superfamily | AT2G01710 | 40.845 | 3.36e-09 | 55.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu1g1919 | K09518 | - | gmx:100788812 | 554.288 |