Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu1g1899 | ATGATGGCTTTTAGGAATATCATGGAATTGGCCATTTTAACATTGGCAGTATGTGCTTCGTTGCAAAATGCATATGCAGAGAAAGTTCATATTGTTGGAGGCGAATTGGGATGGACAATTCCGCTCGGTGGCCCCATAGTTTATGATGCTTGGGCCTCATTGCAAGAATTCGATGTTGGAGACACTCTCTTGTTCAATTTCACAAATGGGGAACAAGATGTAGCAAGAGTCACAAACGAAGCCTACTTAATTTGCAACACTACGAACCCAATCTCCCTAAAGAAGACGGCCCCCGCAAATTTCACCTTGGATGCTGCTGGAGATTACTACTTCATTGGCACCTTGGACCAGCACTGCTTTAAGGGTCAAAAGCTAGCCATTCATGTACATGGCCTTGGTCATTCACCTAGTCCTGCTTCCAGTCCTAGAGGACCGTTCAACTACACAGCTGGTGACACGATGGGGTGGAGTGTGCCCCCTGGTGGTGAAATTGCATATGCCATATGGGCTCAATGGAAAAACTTTACACTTGGAGACAGTCTTGTTTTCTACTACCTTAATGGTACACAAGACGTTGCAGTGGTTACGAAGGAAGCTTACGAGAAGTGTGACACCAACCATACCCTTGCTGTCTATACAAATAGCCCAACCAGAATCATTCTTAACACAACTGGTGAGCATTTCTTCACAAGCACTTACCCCCATCACTGTGCCTTGGGACAGAAGCTAGCTATTAATGTCACTGGCAGTGGTTCCCCTGATACCGCCCTGTCTCCAGAAGGTTCTTTATTTCCCACTTCCCTTGGACCTTCAGCTTCAGCTCTTGCACCATTCAGCTCTGCCCCATCTATGCCTGTCTGCGGATACATGGTCACGCTCTTGTCCATTGGTTTGGCTTTCATCAGTTGA | 909 | 0.4653 | MMAFRNIMELAILTLAVCASLQNAYAEKVHIVGGELGWTIPLGGPIVYDAWASLQEFDVGDTLLFNFTNGEQDVARVTNEAYLICNTTNPISLKKTAPANFTLDAAGDYYFIGTLDQHCFKGQKLAIHVHGLGHSPSPASSPRGPFNYTAGDTMGWSVPPGGEIAYAIWAQWKNFTLGDSLVFYYLNGTQDVAVVTKEAYEKCDTNHTLAVYTNSPTRIILNTTGEHFFTSTYPHHCALGQKLAINVTGSGSPDTALSPEGSLFPTSLGPSASALAPFSSAPSMPVCGYMVTLLSIGLAFIS | 302 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu1g1899 | 302 | SUPERFAMILY | Cupredoxins | 28 | 130 | IPR008972 | - | |
Ssu1g1899 | 302 | Gene3D | - | 28 | 139 | IPR008972 | - | |
Ssu1g1899 | 302 | Gene3D | - | 146 | 258 | IPR008972 | - | |
Ssu1g1899 | 302 | PANTHER | BLUE COPPER PROTEIN | 147 | 271 | IPR039391 | GO:0009055 | |
Ssu1g1899 | 302 | CDD | Phytocyanin | 28 | 129 | - | - | |
Ssu1g1899 | 302 | SUPERFAMILY | Cupredoxins | 146 | 247 | IPR008972 | - | |
Ssu1g1899 | 302 | ProSiteProfiles | Phytocyanin domain profile. | 146 | 249 | IPR003245 | GO:0009055 | |
Ssu1g1899 | 302 | PANTHER | EARLY NODULIN-LIKE PROTEIN 1 | 147 | 271 | - | - | |
Ssu1g1899 | 302 | PANTHER | EARLY NODULIN-LIKE PROTEIN 1 | 10 | 133 | - | - | |
Ssu1g1899 | 302 | ProSiteProfiles | Phytocyanin domain profile. | 28 | 131 | IPR003245 | GO:0009055 | |
Ssu1g1899 | 302 | Pfam | Plastocyanin-like domain | 164 | 241 | IPR003245 | GO:0009055 | |
Ssu1g1899 | 302 | Pfam | Plastocyanin-like domain | 38 | 123 | IPR003245 | GO:0009055 | |
Ssu1g1899 | 302 | PANTHER | BLUE COPPER PROTEIN | 10 | 133 | IPR039391 | GO:0009055 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu1g1899 | Ssu-Chr1 | 51549691 | 51551085 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu1g1899 | 149 | 298 | Phytocyanin Superfamily | AT2G25060 | 37.748 | 8.71e-22 | 88.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu1g1899 | - | - | lang:109328745 | 417.542 |