Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1785 ATGGCGTTTGACCAAACCTCTATCCCTGGCGATGTTGTCCGGCCGCTGAATTCAGTGGCCCGGAGTGTGGCGGAGGAGCCTCTCGTTTTGCCGGCGACTACGGCGGTTCCCGGCGCGGTGCCGATTTTCTACCCTGCGTCTGTCTCTGATGCTGGCTCGGTTGGAATGGGGTATGGAAATGTGGCTTcgtgtggtggtggtggtgctgcTGCCACGTGGTGTGTTCGTCCTGCTGTGCCTattcataatcataatcataatcataatcccTCTGTGAACCCTGCTGTTGGGTTCTCTCATGCTCCTAGTTTTCCCAATAGGGTTGCTGCTCCTGGCGGCAATGCTGTTGATGTTTCGGGTAGTTTTGTGGCCGCTACTCATGGGTATCCTATGAATTTGGGGGGCAACTGGGTTGCCGCGGGTAATGGTTTGgataataatactaatagtaatagtaaaaataatgcTCTTCGGGGGAACAGCAGAGTCATTAGAAATGCTGGTGATCATGTTGGTGGTGTTGGGGTGGTTGGGGTTGGTTCCAATCCGCCTGCAAACCAGCGGGTTGATCAGGTGAGTGAGGAGGGCGGAGATGATTCAGTTTCGGGGCGGAAAATGAAGTTGATGTGCAGTTATGGTGGGAAGATTTTGCCTAGGCCCAGTGACGGGATGTTGAGATATGTTGGAGGGCAGACGAGGATCGTAAGTATTAAGAGAGATGTGAGTTTTAATGATTTGGTGCAGAAGATGGTTAATTCTTTTGGGCAACCTGTGGTTATCAAATATCAGCTCCCTGGTGAGGATCTTGATGCGTTGGTCTCGGTTTCCTGCCCTGATGATCTGGAGAATATGATGGAGGAGTATGAGAGATTGATTGAGAGGTCTGCTGATGGTTCTCCCAAGTTAAGGGTCTTTCTGTTTTCTGCTTCAGAACTTGATCCTTCTGGTGTGGTACAGTTTGTAAATTTGCATGATGGTGGGCTGAAATATGTTGAAGCTGTGAATGGAATTACTGATGGGATTAGTGGTAAGCTAACAAGGAAAGCGAGTTATACGAGTGCAGCTTCTACCCAAAATTCTGATTTGAGCGGGATAGATGCTCCTGATGGCTCAAATGCTGCTCAAGGGGATGTGGGTGGGGTACCTGTACCTATGCCAAGCGCTTTATCACCTGAGGGGAGCGTGGCTGCTTCTCATGATGCTACTGCAAATTCCGTGGTTTCTGAGCCTGGTACATCTTGCACAGATGCTTCTGCTGTTTCACTGGGCATTCCTGTGACTAATTCTGGTCCAACTCACGCTCCACCTTTCCAGAATGAGGTTGAGTTAGAAAAGTCTATACCTGTTACTTTTTCTCAGCCGCAATTTGGTGTGCAGCAATCTGGATTGGAAATTCCACCGTCTGCACCTTTGCAGCCTTTTGTTGATCCTCGCCAGGAATTTATGCACCATGCAGATTATGTCCAGTTGCCTCCCCATATGGGATTCCCAAATCCTCAGCTTTTAGGTAAGCCTGGTTCCATCTACTCCCAACATCATGATAATACTTCTCGTTTTGGGTCTCATCAGGTAATCCCTGCAGTGCAAATGACCATGACTCAGCCATTTTCTCATGCTGGTGTAAGACCAAGTGttgttcaaccacaaccattcaTGCAACCACAGCAAAACCGGTTGGACCAATATAATGATGAAAATACTTCAGGGCTAAGGATTCACCAGCTTCCTGCTGAACAAAGTTACAATGCCTATCCGGTTCAAGTCCCTTTTGGAGGTAATTATGGCTGGGTTAATGTTCCTACGCCAGAGCATGTGATTTTTCCTGATGCATTTGTACCTCAACAACCAGTAATGATCCCTGAGAAAGTCCAGAGAGTGGAGGACTGCTATATGTGTCAGAAAAAGCTGCCTCATGCACATTCGGATCCTGTGGTTCAGGATCAGCGTAATAGCTGTGCTGTTCCAATTCCTGATTCAATCCCAAGTTTCTATGGTCTCCCTATGGAGAACAATTCAAGGGTTCAAGCAACAAATGTGGTTTTGGTGACTGCACCAATGAAAGAAGACAATTTTGAACAAGCAGTTGGGACCAGACCCAAGGTCATTAGCAAATTGGATACTCCAGCTGGAGTACCTTGTGCTGACTCAGCTGGACTTTCACTGGAGCCTGAAGGTGAGAGGCTTTTTATACAAAAACTGGACTGGTCTGATCATCCCAGGAATGCAGTTATTCAGGAAGCAGTTGTTAGAACAGGTGAAAAACAGTCACCAAGTGATGGACAGATGGGAACAGCACTGCTGTCTTATCGAGATGATATTGCCCTCCAACATATGGTGCCAGTTGAAAACTGGGTTAGAGAGGATTCTCTTGtgaataaatatgttaataatgatATACCTTTAGTTGGGGGCACATCTGTTGAAAATTCTGACTGTATGGTTCAAGAATGTCCAACAGAATATACCAATGAACTTGCCAGCACTATTTCAAAAGCAGATGCTGTGGAGAATTGGATAGCGCAGGGCCTTCTCAAACCTATTGATGGAAGGATGGACAACCCAAAGATGGGCAATCctcaaatttttctaaataatgataaatttgattACAGCACTCAGCATGCTGTAGAGAAGAAAGGGTTGGTTCCAGATAACAACCCTGGCAAGTCAAAATTGATCGGTGATGCAAATCAAATTAACATGATGGATATGCTTCCTAGTTCTACAGTGGAAATTTCATCTGGGAATAATTCCAGGCCAGTGGAATATAATGAGGTTACACAACCCTCTGTTTGGGGCATACCTGGATCAAACCCTCAGTCGAAGAGTGGAAACCATCAGAAGGATGATGCAGTTTTATCATCAGTTCCCCCATTTGGTAGGTTTGGAGATGTGCAGGATTCTTCAAACTCACTTTTTAGCAATCAGGATCTCTGGAATATACACAGTACCTACTTTCCACCACCGAGACCTAACAAAGTTGCAGTGAAGAAAGACACCAATTCTAATAAGGATCAGTTTGGTGAGAATCCAGGCAACAGTGgggaacaaaattttgaagctCAAATAGACAATGGCCTCTACCAGACATTCAAACAGAATTTAACATTGGAAGAAGCTCGATCTGCCAAGGTCTCATCAGAAGACCGACAACTTCAAGCTGTTGCTGAAGGTTTAGCTGCTTCTGTTCTGCACTCAAGCACTTCTTCAAATCTTGATTTGCATGCCAGAGATGTGTCCCATCATGAAGACGTTGGCGATGGAGATGTTCAAAATAATCTAATAGATATACAGGATAAAGATAAAGCTCAGGATCTCAAAAGCAAGCTCCCTGAGAAGGCAAATTTTGGCTTTCCAGCATCAGATGTTGGAGCTTTGCAGgttataaaaaattgtgaccTTGAAGAGTTGATAGAGTTGGGTTCTGGGACCTTTGGGACTGTATATCATGGAAAATGGAGGGGTACTGATGTCGCAATAAAGCGGATTAATGATAGGTGTTTTGCTGGAAAGCCTTCGGAGCAAGAGCGCCTGAGAGCCGATTTTTGGAATGAGGCAATCAAGCTTGCTGACTTGCATCATCCAAATGTGGTAGCATTCTATGGTGTTGTGCTTGATGGCCCTGGAGGTTCTGTGGCGACAGTAACGGAGTATATGGTTAATGGTTCTCTAAGAAATGCCTTGCAGAAGAATGGGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCGATGGATGTGGCCTTTGGTATGGAGTACCTGCATGGAAAAAATATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAagGTTGGTGACTTGGGTCTGTCCAAAGTGAAATGCCAGACTTTAATATCCGGTGGTGTTAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTGAACGGGAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCGTTTGGTATTGTCATGTGGGAACTCCTCACGGGAGAAGAGCCATATGCTGATTTGCACTATGGGGCCATCATAGGTGGGATTGTAAACAACACTTTACGACCTCCAGTTCCAGAATCTTGTGATCCAGAATGGAGACTGCTGATGGAGAGGTGCTGGTCGTCAGAACCATCGGAAAGACCTTCCTTCACTGAGATTGCCAATGGATTACGTTCCATGGCAACCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCTGCTTCATCACAGAGTCAAGTGCAGAAATGA 4275 0.4409 MAFDQTSIPGDVVRPLNSVARSVAEEPLVLPATTAVPGAVPIFYPASVSDAGSVGMGYGNVASCGGGGAAATWCVRPAVPIHNHNHNHNPSVNPAVGFSHAPSFPNRVAAPGGNAVDVSGSFVAATHGYPMNLGGNWVAAGNGLDNNTNSNSKNNALRGNSRVIRNAGDHVGGVGVVGVGSNPPANQRVDQVSEEGGDDSVSGRKMKLMCSYGGKILPRPSDGMLRYVGGQTRIVSIKRDVSFNDLVQKMVNSFGQPVVIKYQLPGEDLDALVSVSCPDDLENMMEEYERLIERSADGSPKLRVFLFSASELDPSGVVQFVNLHDGGLKYVEAVNGITDGISGKLTRKASYTSAASTQNSDLSGIDAPDGSNAAQGDVGGVPVPMPSALSPEGSVAASHDATANSVVSEPGTSCTDASAVSLGIPVTNSGPTHAPPFQNEVELEKSIPVTFSQPQFGVQQSGLEIPPSAPLQPFVDPRQEFMHHADYVQLPPHMGFPNPQLLGKPGSIYSQHHDNTSRFGSHQVIPAVQMTMTQPFSHAGVRPSVVQPQPFMQPQQNRLDQYNDENTSGLRIHQLPAEQSYNAYPVQVPFGGNYGWVNVPTPEHVIFPDAFVPQQPVMIPEKVQRVEDCYMCQKKLPHAHSDPVVQDQRNSCAVPIPDSIPSFYGLPMENNSRVQATNVVLVTAPMKEDNFEQAVGTRPKVISKLDTPAGVPCADSAGLSLEPEGERLFIQKLDWSDHPRNAVIQEAVVRTGEKQSPSDGQMGTALLSYRDDIALQHMVPVENWVREDSLVNKYVNNDIPLVGGTSVENSDCMVQECPTEYTNELASTISKADAVENWIAQGLLKPIDGRMDNPKMGNPQIFLNNDKFDYSTQHAVEKKGLVPDNNPGKSKLIGDANQINMMDMLPSSTVEISSGNNSRPVEYNEVTQPSVWGIPGSNPQSKSGNHQKDDAVLSSVPPFGRFGDVQDSSNSLFSNQDLWNIHSTYFPPPRPNKVAVKKDTNSNKDQFGENPGNSGEQNFEAQIDNGLYQTFKQNLTLEEARSAKVSSEDRQLQAVAEGLAASVLHSSTSSNLDLHARDVSHHEDVGDGDVQNNLIDIQDKDKAQDLKSKLPEKANFGFPASDVGALQVIKNCDLEELIELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESCDPEWRLLMERCWSSEPSERPSFTEIANGLRSMATKISPKGQNQQQQPASSQSQVQK 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1785 1424 CDD PB1_UP2 209 307 - -
Ssu1g1785 1424 PRINTS Tyrosine kinase catalytic domain signature 1216 1229 IPR001245 GO:0004672|GO:0006468
Ssu1g1785 1424 PRINTS Tyrosine kinase catalytic domain signature 1253 1271 IPR001245 GO:0004672|GO:0006468
Ssu1g1785 1424 PRINTS Tyrosine kinase catalytic domain signature 1324 1346 IPR001245 GO:0004672|GO:0006468
Ssu1g1785 1424 PRINTS Tyrosine kinase catalytic domain signature 1368 1390 IPR001245 GO:0004672|GO:0006468
Ssu1g1785 1424 SUPERFAMILY CAD & PB1 domains 221 311 - -
Ssu1g1785 1424 Pfam Protein tyrosine and serine/threonine kinase 1139 1395 IPR001245 GO:0004672|GO:0006468
Ssu1g1785 1424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1259 1271 IPR008271 GO:0004672|GO:0006468
Ssu1g1785 1424 MobiDBLite consensus disorder prediction 929 950 - -
Ssu1g1785 1424 Gene3D Transferase(Phosphotransferase) domain 1 1222 1424 - -
Ssu1g1785 1424 CDD STKc_MAP3K-like 1140 1395 - -
Ssu1g1785 1424 ProSiteProfiles Protein kinase domain profile. 1134 1401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g1785 1424 MobiDBLite consensus disorder prediction 178 204 - -
Ssu1g1785 1424 Gene3D - 226 309 - -
Ssu1g1785 1424 MobiDBLite consensus disorder prediction 1005 1019 - -
Ssu1g1785 1424 MobiDBLite consensus disorder prediction 397 414 - -
Ssu1g1785 1424 ProSitePatterns Protein kinases ATP-binding region signature. 1140 1171 IPR017441 GO:0005524
Ssu1g1785 1424 MobiDBLite consensus disorder prediction 997 1019 - -
Ssu1g1785 1424 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 163 949 - -
Ssu1g1785 1424 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 961 1404 - -
Ssu1g1785 1424 Pfam PB1 domain 225 307 IPR000270 GO:0005515
Ssu1g1785 1424 PANTHER SERINE-THREONINE PROTEIN KINASE 163 949 - -
Ssu1g1785 1424 PANTHER SERINE-THREONINE PROTEIN KINASE 961 1404 - -
Ssu1g1785 1424 MobiDBLite consensus disorder prediction 355 414 - -
Ssu1g1785 1424 SMART PB1_new 220 309 IPR000270 GO:0005515
Ssu1g1785 1424 SUPERFAMILY Protein kinase-like (PK-like) 1129 1395 IPR011009 -
Ssu1g1785 1424 SMART serkin_6 1134 1405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g1785 1424 Gene3D Phosphorylase Kinase; domain 1 1127 1221 - -
Ssu1g1785 1424 MobiDBLite consensus disorder prediction 1401 1424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1785 Ssu-Chr1 44628396 44634513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1785 186 678 MAP Kinase Kinase Kinase AT3G46920 39.364 7.65e-82 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ssu1g1785 PK_Tyr_Ser-Thr 3.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1785 - - gmx:100776264 2371.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0772 6 12219130 12224531 Ssu1g1785 1 44628396 44634513 PCT
Ssu6g0921 6 14893982 14902419 Ssu1g1785 1 44628396 44634513 PCT