Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1784 ATGGCTGGAATGCTTCCGGGAGTTGAATGTGCTAGAAGGAGACGGCTCCATCGAGGCTTGGATTCAAATTCAACTTCTTCAGCTTCTCATGCATCCACAAGGCGCTCTTCTTTCTGTTTGTATGCTAGTAACCATGAATCTCGTCTTTCCTCGTCATCCTCCACACTGACACACCCAGATGAGAATATGGGAGGAGCAGCCAAAGAAGCCAAACAGAGATTGGATGACAAGTTCAGAGCACAAAGGATGTCAGAAAACAAAAGGTATAACAAAATCAAGACCAACAAGTTTTTGTTACTCAGATCTGATTATGCAAACCAGCATAAAATGTGTGGAGGGCAGAAGAACAAGCATAGCAGAGTTGCACAGAGAGGTATATGGGTCAAAGAAAAGTGGTTCAAGGAAATTCAGTTGGACCAAATGGAGCTGGAAGGCCTCAGCACAAGAGGATTGTGCCGTGTGCTTGGAATCATTCAGGATTGGAGAGACACTGATGCATCTTCCTTGTGCCCATAG 516 0.4496 MAGMLPGVECARRRRLHRGLDSNSTSSASHASTRRSSFCLYASNHESRLSSSSSTLTHPDENMGGAAKEAKQRLDDKFRAQRMSENKRYNKIKTNKFLLLRSDYANQHKMCGGQKNKHSRVAQRGIWVKEKWFKEIQLDQMELEGLSTRGLCRVLGIIQDWRDTDASSLCP 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1784 171 MobiDBLite consensus disorder prediction 50 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1784 Ssu-Chr1 44517683 44518868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1784 1 93 C3H Transcription Factor Family AT2G15580 45.872 1.04e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1784 - - gmx:100527583 125.176