Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1773 ATGATCATGGGACACCAAAAACCTGCATGGTTGGAAGCTCTTTATGCACAAAACTTCTTTGTGGGGTGCTCTCACCATGAGAATGCCAAAAAGAATGAGAAGAACATATGCTGCTTAGATTGTTGCACCAGTATTTGTCCCCACTGCTTGCCATCCCATCGCTTCCATAGGCTTCTTCAGGTTCGCCGTTACATTTATCATGATGTTGTCAGATTGGAAGATCTTCAGAAACTCATAGATTGCTCTAACGTGCAGGCTTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCTCAAAACCGGCAATTCAAGGGGTCAGGAAACTACTGCACTTCCTGTGATAGAAGTCTCCAAGAACCTTTTATCCATTGCTCTCTAGGATGCAAGCTAAGTCCTGATTTCCTAGCCCCACAAGAGATGGGTGATGATGAGATGACTCGTTCAACCATTGTGGACTGTGATGAGCCAATGAGCTCGTCTTCAGGGTCAGAGAACATGAGCATGGCTTGCACAGAGATTGTTAGAAAGAAGCGTAGTGGGTGGAATGTGTGTGTAAGATCAATGACCAACAAGGTTTCGGATGAAGACATGGCTACCAGCATGAGTAAAAGGAAAGGCATCCCTCATAGATCTCCTTTGTGTTAG 654 0.448 MIMGHQKPAWLEALYAQNFFVGCSHHENAKKNEKNICCLDCCTSICPHCLPSHRFHRLLQVRRYIYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKLSPDFLAPQEMGDDEMTRSTIVDCDEPMSSSSGSENMSMACTEIVRKKRSGWNVCVRSMTNKVSDEDMATSMSKRKGIPHRSPLC 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1773 217 MobiDBLite consensus disorder prediction 198 217 - -
Ssu1g1773 217 Pfam PLATZ transcription factor 62 133 IPR006734 -
Ssu1g1773 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 217 - -
Ssu1g1773 217 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Ssu1g1773 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1773 Ssu-Chr1 44198036 44199735 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ssu1g1773 PLATZ 4.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1773 - - aprc:113852363 421.779