Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1762 ATGGGGAAGAAAAAGAAGCAGGTAGGAGAAACAAGTGAAGATAGAGGAAATCATAAGAAAGTTGAAGATAAAAGCTCCAAATCATATGACAATGATACCATGGTGTTTATATCAATGTCTCAAGAGTTGAAGGATGAGGGGAACAAGTTGTTCCAGAAGCGAAATCTTGAAGGTGCTTTGGTAAAATATGAGGAGGCCCTCAAATTGCTTCCAAAGTATCATGTAGATGTGTCTTATCTGCGGAGTAACATGGCTGCGTGCTACATGTAA 270 0.3926 MGKKKKQVGETSEDRGNHKKVEDKSSKSYDNDTMVFISMSQELKDEGNKLFQKRNLEGALVKYEEALKLLPKYHVDVSYLRSNMAACYM 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1762 89 PANTHER PROTEIN PHOX3 2 89 - -
Ssu1g1762 89 MobiDBLite consensus disorder prediction 1 27 - -
Ssu1g1762 89 PANTHER PROTEIN CLMP1 2 89 IPR044517 -
Ssu1g1762 89 Gene3D Tetratricopeptide repeat domain 38 89 IPR011990 GO:0005515
Ssu1g1762 89 SUPERFAMILY TPR-like 39 89 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1762 Ssu-Chr1 43793605 43793874 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1762 - - gmx:100820306 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0945 6 15245656 15247855 Ssu1g1762 1 43793605 43793874 PCT