Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1714 atgacaacaataataacaacaGGTGGGGGACCTTACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGCctatgcttcttccttggaaaTGCTGTTGCCGGAGCACTTTACGTATTGGGAGCAGTAGAAACATTTTTGAAAGCAGTTCCTTCTGCTGGGATTTTTAGAGAGACAATCACACAAGTTAATGGTACTGCAATTGCACAACCAATTGAGAGTCCAAGTTCTCATGACTTGCAAATATATGGGATTGTTGTGACTATTCTGTTATGCTTTATTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCGCCTGCTTTTCTCATACCTGTTTTATTCTCAGTCTTCTgcatttttttgggaatttttttggCAAGGAAGGATCATCCTACAGAGGGAATTACTGGGTTGAGTTCAGAGACATTCAAAGAAAATTGGAGTTCAGATTATCAAAAAACTAATAATGCTGGAATTCCAGAAACTGATGGCTCAGTAAGCTGGAATTTCAATTCATTGGTAGGCCTCTTTTTCCCTGCTGTGACGGGAATAATGGCAGGTTCTAATCGATCATCCTCTCTGAAAGATACTCAGCGATCAATTCCTGTTGGAACTTTAGCTGCAACTCTTACAACTACTTCTCTGTATCTTGTTTCTTTGATGTTGTTTGGCGCCGTTGCCAACAGAGAGAAGCTTTTAACTGACAGGCTACTTACAGCTACAATTGCCTGGCCTTTtccttcattaattaaaattgggaTTATTCTTTCAACTATGGGTGCTGCTCTTCAGAGCTTGACTGGTGCCCCGCGTCTGCTTGCAGCAATAGCCAATGATGATATTTTACCTATTTTGAACTACTTTAAAGTTGCAGATGGTAGTGAACCACATGTCGCTACCCTTTTTACTGCTTTCTTATGCATTGGGTGTGTCGTTATTGGGAATCTGGATCTTATCACTCCAACTGTAACTATGTTTTTTCTTCTATGTTACACTGGTGTCAACTTATCCTGCTTCCTTCTCGATCTTCTAGATGCCCCTAGTTGGCGTCCTCGGTGGAAATTTCACCATTGGAGTCTGTCCCTTGTGGGAGCATTACTTTGCATAGTGATCATGTTCCTAATCTCTTGGTCATTCACCGTGGTATCTTTGGCCCTTGCAAGCCTCATATATAAGTACGTGAGCATTAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCTTATTTCCAACTAGCACTTCGCAGCCTTCGGTCCCTAGGAGCAAGCCAAGTGCACCCAAAGAATTGGTATCCAATTCCACTAATATTTTGCCGACCCTGGGGTAAACTGCCAGAAAATGTTCCCTGTCATCCCAAACTTGCAGATTTTGCTAACTGTATGAAGAAGAAAGGTCGAGGAATGTCCCTATTTGTCTCTATACTAGATGGGGATTACCATGAATGTGCTGAAGATGCCAAGGCTGCTTGTAAACAACTTAGCACTTAcattgattacaaaaattgtgaaGGTGTGGCTGAGATTGTTGTAGCCCCTAACATGTCTGAAGGCTTCCGTGGTATTATTCAGACAATGGGCCTTGGCAATCTCAAGCCGAACATTGTGGTGATGCGTTACCCAGAAATCTGGCGTAGGGAAAACTTGACAGAAATCCCTGCCACCTTTGTTGGGATAATTAATGATTGCATTGTTGCAAACAAGGCTGTGGTTATAGTTAAGGGTCTTGATGAATGGCCAAATGAGTACCAGAGGCAGTATGGTACAATTGATTTGTATTGGATTGTAAGAGATGGTGGTCTCATGCTTCTTCTCTCTCAGCTCCTTCTTACCAAGGAGAGCTTTGAGAATTGCAAGATTCAGGTCTTTTGTATTGCAGAAGAGGATGCAGATGCAGAGGGGCTGAAAGCTGATGTGAAAAAATTCCTTTATGATCTTCGGATGCAAGCGGAAGTCATTGTCATAACAATGAAATGGGATGCACAGATGGATGGTGGTGGTGGGTCTCCGCAAGATGAGTCATTGGAAGCATTTACTAGTGCTCAGCATAGAATTGCTGATTACTTAACCCAAATGAAGGCGACAGCAGAGAGAGAAGGTACTCCTCTAATGGCAGATGGTAAGCCTGTGGTTGTGAACGAGCAGCAGGTTGAGAAGTTTCTTTACACAACACTTAAGCTCAATTCAACAATTTTGAGATATTCAAGAATGGCTGCTGTTGTGTTGGTAAGTCTGCCTCCACCTCCACTGAGCCACCCAGCATATTTCTATATGGAGTACATGGATCTGTTGCTGGAGAATATACCAAGGATTTTGATTGTAAGAGGATATCGTAGAGACGTTGTAACTCTATTCACATAG 2379 0.4107 MTTIITTGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAIAQPIESPSSHDLQIYGIVVTILLCFIVFGGVKMINRVAPAFLIPVLFSVFCIFLGIFLARKDHPTEGITGLSSETFKENWSSDYQKTNNAGIPETDGSVSWNFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLTTTSLYLVSLMLFGAVANREKLLTDRLLTATIAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVVIGNLDLITPTVTMFFLLCYTGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLVGALLCIVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSLFVSILDGDYHECAEDAKAACKQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFENCKIQVFCIAEEDADAEGLKADVKKFLYDLRMQAEVIVITMKWDAQMDGGGGSPQDESLEAFTSAQHRIADYLTQMKATAEREGTPLMADGKPVVVNEQQVEKFLYTTLKLNSTILRYSRMAAVVLVSLPPPPLSHPAYFYMEYMDLLLENIPRILIVRGYRRDVVTLFT 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1714 792 Gene3D Amino acid/polyamine transporter I 1 407 - -
Ssu1g1714 792 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 7 791 IPR004842 GO:0006811|GO:0015377|GO:0016021
Ssu1g1714 792 Pfam Solute carrier family 12 591 791 IPR018491 GO:0006811|GO:0016020|GO:0022857
Ssu1g1714 792 Pfam Solute carrier family 12 459 580 IPR018491 GO:0006811|GO:0016020|GO:0022857
Ssu1g1714 792 Pfam Amino acid permease 1 425 IPR004841 GO:0016020|GO:0055085
Ssu1g1714 792 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 7 791 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1714 8 792 Inorganic Solute Cotransporters AT1G30450 84.879 0.0 1366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1714 K14427 - gmx:100795205 1466.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1714 1 42270416 42289140 Ssu1g1714 1 42270416 42289140 ECH