LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu1g1698	ATGATGGGGATCATTTATGTAGCACAttgggtggtggtggtgttttGCTTGGGGGTGTTTTCACCTTGCTTTTGTCAAGATGGTTCAGATGATGCTACCACTGCTGTGTATGTTGTTACTCTGAGACATGTTCCTGTTTCTCATTACTATGGTGTGTTGAGAAGAGAGGTTAATGGCTTCAAAGATGATGCTGCTCCTGGAAGAACTCAATTTCACAAACCAAGGTATGACAATATTACTAAGACAGATAAGAGATATGGCTCTTACATTGCCCGAGTtcatgattctttgttgaaaaaagtgttaaatGGAGAGAAATATCTGAAACTCTATAGCTACCATTACCTGATAAATGGATTCGCCGTGCTGGTTACCCAACAACAGGCAGAGAAACTATCAAGGAGCAGTGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTAAGGACTGCGACTACGCATACGCCACAGTTTCTGGGTCTGCCGCAGGGCGCATGGGTTCAAGATGGTGGGTTTGAAACTGCTGGAGGAGGAGTTGTTATCGGGTTTATTGACACCGGCATAGATCCAACTCATCCTAGCTTTGGTGATAGTAAATCTGAACATCCATATCCTGTTCCTGCTCACTTTTCTGGCATCTGCGAGGTTACTCGTGACTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTTGGGGCCCGTCATTTTGCAGCTTCTGCCATAACCAGAGGAATATTTAATTCAACTCAGGACTATGCATCTCCCTTTGATGGCGATGGCCATGGCACGCATACGGCATCTGTTGCAGCAGGAAACCATGGGATTCCAGTGATTGTTGCTGGACATCACTTTGGAAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCCGTTTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAAGATGGGGTTGACATAATAAGCTTGTCAATTACTCCTAATAGACGTCCTCCTGGTGTTGCAACTTTCTTCAATCCCATAGACATGGCACTGTTGTCAGCTGTGAAGGCTGGTATTTTTGTAGTGCAAGCAGCAGGAAATACTGGACCGTCACCAATGAGCATCTTCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCCTCTCATGACCGGGTTTATAGCAACTCCATATTTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCGTcTGGCACAGATGAAAGAAAACTTTATACACTGATTCACGCACACGATGCTTTGAGCAATGACACAACAGTTACTGATGATATGTATGTTGGAGAGTGCCAAGATGCAAGTAAGTTCAGTAAGGATTTGATCAAGGGGAACCTCTTGATGTGCAGCTATTCAATTCGATTTGTGCTGGGACTCTCCACAATCAAACGGGCCTCAGAAACAGCCAAAAACCTTAGTGCAGCTGGTGTTGTCTTCTATATGGATCCCTTTGTGATTGGTTTTCAACTTAATCCCGTTCCAATAAAAATGCCCAGCATAATAATTGCATCCACAAATGATTCCAAGATTTTAATGCAATACTACAATTCTTCGCTGGAAATAGATGCAGTTTCaaagaaaattgttaaatttgggGCTGTTGCCGCGATCTGCGGTGGACTAAAAGCAACATACGGCAATGCTGCCCCCAAGGTTATGTATTACTCTGCAAGAGGACCAGATCCGGAGGACAGTCTTCCCCACGAAGCTGACATTTTGAAACCTAACTTGTTAGCTCCTGGAAATTTTATATGGGCTGCTTGGAGTTCTCTTGGCACCGATTCGGTTGAATTCTTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCACATGTTGCTGGTCTTGCTGCGCTAATTAGGCAAAAGTTCCCCAATTTCAGTCCTGCAGCCATTGGATCTGCACTTTCCACTACGGCTTCTCTGTATGACAAGAGTGGTGGGCCAATAATGGCTCAGCGATCATATGCCTCCCCAGAACTAAACCAATCTCCGGCTACTCCTTTTGACATGGGAAGTGGTTTTGTGAATGCAAGTGGAGCACTGAATCCGGGTTTGATTTTTGATTCCTGGTTATGA	2127	0.4335	MMGIIYVAHWVVVVFCLGVFSPCFCQDGSDDATTAVYVVTLRHVPVSHYYGVLRREVNGFKDDAAPGRTQFHKPRYDNITKTDKRYGSYIARVHDSLLKKVLNGEKYLKLYSYHYLINGFAVLVTQQQAEKLSRSSEVSNVVLDFSVRTATTHTPQFLGLPQGAWVQDGGFETAGGGVVIGFIDTGIDPTHPSFGDSKSEHPYPVPAHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSIFSFSPWIFTVGAASHDRVYSNSIFLGNNVTIPGVGLASGTDERKLYTLIHAHDALSNDTTVTDDMYVGECQDASKFSKDLIKGNLLMCSYSIRFVLGLSTIKRASETAKNLSAAGVVFYMDPFVIGFQLNPVPIKMPSIIIASTNDSKILMQYYNSSLEIDAVSKKIVKFGAVAAICGGLKATYGNAAPKVMYYSARGPDPEDSLPHEADILKPNLLAPGNFIWAAWSSLGTDSVEFLGENFAMMSGTSMAAPHVAGLAALIRQKFPNFSPAAIGSALSTTASLYDKSGGPIMAQRSYASPELNQSPATPFDMGSGFVNASGALNPGLIFDSWL	708

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu1g1698	708	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	180	191	IPR023827	-
	Ssu1g1698	708	Pfam	Subtilase family	175	661	IPR000209	GO:0006508\|GO:0008236
	Ssu1g1698	708	PANTHER	TRIPEPTIDYL-PEPTIDASE II-RELATED	22	706	-	-
	Ssu1g1698	708	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	22	706	IPR045051	-
	Ssu1g1698	708	CDD	Peptidases_S8_3	150	657	IPR034197	-
	Ssu1g1698	708	PRINTS	Subtilisin serine protease family (S8) signature	620	636	IPR015500	-
	Ssu1g1698	708	PRINTS	Subtilisin serine protease family (S8) signature	175	194	IPR015500	-
	Ssu1g1698	708	PRINTS	Subtilisin serine protease family (S8) signature	255	268	IPR015500	-
	Ssu1g1698	708	ProSiteProfiles	Serine proteases, subtilase domain profile.	155	698	-	-
	Ssu1g1698	708	Pfam	Peptidase inhibitor I9	36	150	IPR010259	-
	Ssu1g1698	708	Gene3D	-	390	558	-	-
	Ssu1g1698	708	CDD	PA_subtilisin_like	399	531	-	-
	Ssu1g1698	708	Gene3D	Peptidase S8/S53 domain	177	705	IPR036852	GO:0004252\|GO:0006508
	Ssu1g1698	708	ProSitePatterns	Serine proteases, subtilase family, serine active site.	621	631	IPR023828	-
	Ssu1g1698	708	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	24	148	IPR037045	-
	Ssu1g1698	708	SUPERFAMILY	Subtilisin-like	150	702	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu1g1698	Ssu-Chr1	41588435	41596576	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu1g1698	1	706	Subtilisin-like Serine Gene Family	AT4G20430	69.874	0.0	1023

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu1g1698	-		-	gmx:100796456	1300.8