Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1668 ATGCAAGCGGTGGCCGGAGAAGCCCGTCATCGCGATTGGCATTTCTTCATGCTGGTCTCACTCGCGAGCCAGATCTGCTTCCGATCACCGTCCTCCGCCGAACTCCTGATGGTGGCGGTCCCGCTCCTCCTCGTCACGCTCGTGCTCTACCTCATGCCTTCCACCTCCTCCAACGAGTCCATCCAAGAATACGCCCTCACGCACCGCAAGGTGGCCCTCGATCGGAAAACCTCCTTCGTCGTCGTCTTCGACGCCAGCAGCTCCGGCAGCCATATTAAGCCTAGTTTGAGTGCTTATGCACAAAATCCACGACAAGCAGTGGggtctttgattttttttcttttggataaaGCGGAGAGTGTTGTTCCTCGGGAGTTTAGGCCAAAGACACCCGTTAGAGTTGGGGCTACTGCTGGTTTAAGGGCTTTGGAAAGAGATGCTTTTGACAGCATTTTGCAAGCGGTTCGGGATTTGCTTAAGCAAAGAAGCACTCTAAAATTTGAGCCTAATGCAGTTACAGTGCTGGATGTATGTTGGTGTTGTGGCTGGCAACATGTTCGATGA 564 0.5124 MQAVAGEARHRDWHFFMLVSLASQICFRSPSSAELLMVAVPLLLVTLVLYLMPSTSSNESIQEYALTHRKVALDRKTSFVVVFDASSSGSHIKPSLSAYAQNPRQAVGSLIFFLLDKAESVVPREFRPKTPVRVGATAGLRALERDAFDSILQAVRDLLKQRSTLKFEPNAVTVLDVCWCCGWQHVR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1668 187 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 92 185 IPR000407 GO:0016787
Ssu1g1668 187 Pfam GDA1/CD39 (nucleoside phosphatase) family 92 176 IPR000407 GO:0016787
Ssu1g1668 187 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 31 92 IPR000407 GO:0016787
Ssu1g1668 187 PANTHER APYRASE-LIKE PROTEIN 31 92 - -
Ssu1g1668 187 PANTHER APYRASE-LIKE PROTEIN 92 185 - -
Ssu1g1668 187 Gene3D - 93 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1668 Ssu-Chr1 40596581 40597216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1668 35 186 Calmodulin-binding Proteins AT3G04080 47.753 2.23e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1668 K14641 - pvu:PHAVU_004G077600g 187.193