Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1632 ATGGGTGTTGGTCTGTCCAAGTTCGTGCCATATGAGGTCATGCATGAGAGGACTGTGATGGCAGGTGGAACTTATGGATATCTTGCTCCAGAATTTGTGTATAGAAACGAGCTTACAACAAAGAGTGACGTATATAGTTTTGGTGTCCTACTACTTGAAATAGTAAGTGGACGTAGACCTGCACAGGCAGTTGATTCTGTGGGTTGGCAGAGTATATTTGAATGGGCAACACCTCTTGTGCAAGCTCATCGCTATCATGAACTCTTGGATCTGCATATAACTTCTTCCTCGTCTAGTATCATCCCAGAGGCTAGTACCATCCAAAAGGTGGTTGACCTTGTTTATTCTTGCACGCAGCATGTCCCTTCTATGCGCCCTAGAATGTCTCATGTTGTTCACCAGCTGCAACAGATTGCCCAGCCACCTGCAAAGTAA 435 0.4529 MGVGLSKFVPYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYHELLDLHITSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQIAQPPAK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1632 144 ProSiteProfiles Protein kinase domain profile. 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g1632 144 Pfam Protein tyrosine and serine/threonine kinase 15 135 IPR001245 GO:0004672|GO:0006468
Ssu1g1632 144 PANTHER - 1 143 - -
Ssu1g1632 144 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 143 - -
Ssu1g1632 144 SUPERFAMILY Protein kinase-like (PK-like) 4 136 IPR011009 -
Ssu1g1632 144 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1632 Ssu-Chr1 38998468 38998902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1632 1 141 Receptor kinase-like Gene Family AT1G52310 82.394 4.77e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Ssu1g1632 PK_Tyr_Ser-Thr 3.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1632 - - gmx:100779497 275.404