Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1594 ATGTTTGACATGAACAGGGCCATGGATTCGAAATTTTCTGCAACAATgaagaataataatgataataattgtaatatgaagaagaaggaagatcTCTCTGTGCACCTTTCAACCCCACCCATTTCCAAAGTGGAAACTTTAAGCTCCAACAATCTCCAATTTGATCGATTGCAGCCATCAGATCGAGAATTGGGTCGAGTAAATAGATTTAAGTTTGGGCAATTTGTTGCACGAGAAGCTGTGCTTGATGAAGAGTATTGGACAGCAGCATGGTTAAGGGCAGAAAGTCACTGGGAGAATCGACCATATGAAAGATATGTTGATAACTATAAAAGGAAATTTGCCGAGCAGGAATTTAATGCATTAAAAAGGCGGTGCAAGGTGCAAAATGGTGATAGCTGCGAGTGCATCATCACGGTGAGGAAGAAGCAGAAGAATGTAAAGCACTCAATATTAAAATGTGTTGTAGGAACCCTTGATTTGAATATCCGATATTTGCTGCAAGGGGAGACTTTTCCTGGGGAACGGGTAAAGGCTCCTCTTTTTTGCAGCATCAACAGAACACCACCCAGCAGATATGGCTACATTGCGAACTTATGCGTTATCAAATCAGCTCGGCGACAGGGAATTGCAAGCAACATGATGTCTTTTGCTATTGAAGCTGCAAAATCTAATGCAGGTGTGACACAGGTATATGTGCATGTGGACAGAAATAATAGGCCTGCACAGATATTGTACCAAAAGATGGGCTTCGAGCTTCCTTGCCCTTCTCAGATGGTTGAAATGGCAAACTCTCGGTTGTTAGAGGAAACATACTTGCTACGGTTACAGACATAA 837 0.4014 MFDMNRAMDSKFSATMKNNNDNNCNMKKKEDLSVHLSTPPISKVETLSSNNLQFDRLQPSDRELGRVNRFKFGQFVAREAVLDEEYWTAAWLRAESHWENRPYERYVDNYKRKFAEQEFNALKRRCKVQNGDSCECIITVRKKQKNVKHSILKCVVGTLDLNIRYLLQGETFPGERVKAPLFCSINRTPPSRYGYIANLCVIKSARRQGIASNMMSFAIEAAKSNAGVTQVYVHVDRNNRPAQILYQKMGFELPCPSQMVEMANSRLLEETYLLRLQT 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1594 278 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 277 - -
Ssu1g1594 278 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 277 - -
Ssu1g1594 278 CDD NAT_SF 182 234 - -
Ssu1g1594 278 Pfam Acetyltransferase (GNAT) family 132 251 IPR000182 GO:0016407
Ssu1g1594 278 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 182 278 IPR000182 GO:0016407
Ssu1g1594 278 Gene3D - 79 258 - -
Ssu1g1594 278 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 184 252 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1594 Ssu-Chr1 37792548 37794382 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu1g1594 Acetyltransf_1 3.7e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1594 - - gmx:100795426 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1594 1 37792548 37794382 Ssu1g1594 1 37792548 37794382 ECH
Ssu6g0592 6 9240229 9242053 Ssu1g1594 1 37792548 37794382 PCT