Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1575 ATGGCTGAAAAAGTAGGCAAGACTTCGAGTAGTGGCCGGCTCAGTTTTAAGACCatgattaataagaatgaaGGGGGGAAAGAACAAGTCATTGATGTAGACAAGctcaagaaaatgaaacaagagAAAGTTTCTGCTTGGACTATGAAAGGGTTGATTAATGTGATAAGAAGTTCTGGGTTGTCTACCATCTCCTATACACCAGAGAGTGCCAATGAAGATGAGAGTGACCAGAAAGATAATGAAATTACTAGTGAGCGGGAAGCCGAGGCAGCTGCTAAGCAAATTTTCAGGAACGTAGCCAAGCAAGGAAACAACATTGTTACCCTCTGA 333 0.3874 MAEKVGKTSSSGRLSFKTMINKNEGGKEQVIDVDKLKKMKQEKVSAWTMKGLINVIRSSGLSTISYTPESANEDESDQKDNEITSEREAEAAAKQIFRNVAKQGNNIVTL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1575 110 MobiDBLite consensus disorder prediction 65 89 - -
Ssu1g1575 110 MobiDBLite consensus disorder prediction 1 20 - -
Ssu1g1575 110 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2 106 - -
Ssu1g1575 110 MobiDBLite consensus disorder prediction 72 89 - -
Ssu1g1575 110 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 2 106 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1575 Ssu-Chr1 37311633 37311965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1575 2 108 Mechanosensitive Ion Channel Family AT5G12080 51.852 2.58e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1575 K22048 - gmx:100777332 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1575 1 37311633 37311965 Ssu1g1575 1 37311633 37311965 ECH