Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1569 ATGGATCACTCTGTTTTGTTGTCCAACCTTCAACTTCAAGCCTTTACGAGGTACTTTGGGGAGGGTAAGAAGGATGGAGGGCCTGGTTACGAGGAAAAAGAACATCTTGATGCCATTTTCACACTCCTTAAGTACATTTATGACTTTAGTGTTTCCGACTATGTCCCTTGCTTGAGGGGACTTGACTTGGATGGTCATGAGGGCAAGGTGAAGAAGGCCATAGAAACCGTGAATAAGTATCATGATCCCATCATCGAGCAGCGAATCAAAGAATGGAATAATGGGTCCAAGATTGATGGAGAAGATTTCCTTGATATCCTCATCTCACTCAAAGATGCCAACAATAACCCAATATTGACAAACCAGGAAATCAAGACGCAAATCataGAATTGATGATGGCGGCAGTGGATAACCCATCAAATGCAGTTGAATGGGGTCTTGCAGAGATGATAAACCAACCTAAGTTGCTTCAGTGCGCCACAGAAGAATTGGACAAGGTAGTAGGGAAAAAGAGATTGGTTCAAGAATCAGACATCCCAAATCTCAACTACATAAAAGCATGTGCAAGAGAAGCTTTTCGCCTTCATCCCTTTATAGCTTTCAATGTTCCCCATGTCTCTATGAAAGACACAATAGTGGGCAATTACCTAATCCCTAAGGGTAGCCACATTCTTTTAAGTAGACAAGAGCTTGGACGAAACCCAAAAATTTGGAGTGATGAACCCCACAAGTTTAAGCCAGAACGTCACCTTAAGAGTGAGGTGGTTTTAACAGAACCAGATTTGAAGTTCATATCATTTAGCACAGGAAGACGTGGTTGCCCAGGAGTCATACTTGGCACCACAATGACTGTGATGCTATTTGCTAGGTTGCTCCATGCCTTTAGTTGGACCACACCACCCAATGTGTCACATATCAACCTTGTTGAGTCCAATCATGACATATCTCTCGCTCACCCACTTGTGGCACTAGCAATGCCAAGATTAGCACCCGAGCTTTACACTAAATAA 1011 0.4293 MDHSVLLSNLQLQAFTRYFGEGKKDGGPGYEEKEHLDAIFTLLKYIYDFSVSDYVPCLRGLDLDGHEGKVKKAIETVNKYHDPIIEQRIKEWNNGSKIDGEDFLDILISLKDANNNPILTNQEIKTQIIELMMAAVDNPSNAVEWGLAEMINQPKLLQCATEELDKVVGKKRLVQESDIPNLNYIKACAREAFRLHPFIAFNVPHVSMKDTIVGNYLIPKGSHILLSRQELGRNPKIWSDEPHKFKPERHLKSEVVLTEPDLKFISFSTGRRGCPGVILGTTMTVMLFARLLHAFSWTTPPNVSHINLVESNHDISLAHPLVALAMPRLAPELYTK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1569 336 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 267 276 IPR017972 GO:0005506|GO:0016705
Ssu1g1569 336 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 334 - -
Ssu1g1569 336 SUPERFAMILY Cytochrome P450 30 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1569 336 Gene3D Cytochrome P450 9 318 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1569 336 PRINTS E-class P450 group I signature 123 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1569 336 PRINTS E-class P450 group I signature 228 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1569 336 PRINTS E-class P450 group I signature 274 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1569 336 PRINTS E-class P450 group I signature 264 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1569 336 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1569 336 PRINTS E-class P450 group I signature 143 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1569 336 Pfam Cytochrome P450 48 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1569 336 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 16 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1569 Ssu-Chr1 37114877 37117040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1569 17 334 Cytochrome P450 AT5G05260 56.075 5.40e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1569 - K14984 gmx:100786887 563.533