Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1522 ATGCCTGTAGATCTTAGTGAAGATCACCCCTACCAGCTCTTCAGTACAAACCATcaagccttttctttttcttcttctctatcTTATTCTTTACTCTTCAACCTGGATCAAGATCAAGGAGGGTCTTGCACTTGGGAAACAAAACACTTACAAAGTGATGAAGAGGACGAGAAGATTGTTCCTTTTAGTGGATCTTGGAATCATCTAGCtgcaaaaaagaatgaaattaacAGAAGTGATCTCAAGCTGAGAGTTTGGAAGAAAGAAGATGGGTGTGAAAATCTTCAAGCTAAAGATAGTTCAACAAAGTGGATGCCTTCAAACATGAGAATGATGTGGAGGATGATGGTGTCAGATCAAAAGGGTTTTGATATAGTAGGCGTATCTAACTTTAAGCAGATCAAGTATGAAGAGAAAAACTCACCACTGTCACCTCTAGGAATTGATGGTAGTAACTACATTTCTTCTTCAAGCCACAACAATATTATTGTTAGGATTTATGCTGATTCCCGCACCACTAAGACCCCTCTCTAG 534 0.3596 MPVDLSEDHPYQLFSTNHQAFSFSSSLSYSLLFNLDQDQGGSCTWETKHLQSDEEDEKIVPFSGSWNHLAAKKNEINRSDLKLRVWKKEDGCENLQAKDSSTKWMPSNMRMMWRMMVSDQKGFDIVGVSNFKQIKYEEKNSPLSPLGIDGSNYISSSSHNNIIVRIYADSRTTKTPL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1522 177 PANTHER GATA TRANSCRIPTION FACTOR 21-LIKE 1 177 - -
Ssu1g1522 177 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1522 Ssu-Chr1 35796679 35797405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1522 - - gmx:100780875 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1522 1 35796679 35797405 Ssu1g1522 1 35796679 35797405 ECH
Ssu6g0661 6 10328249 10329548 Ssu1g1522 1 35796679 35797405 PCT