Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1495 ATGGAATACATTAACGACTCGTCGGAACCGTTATTACTGTTCAGAGAGTATAACAGCGACGCCTTCTCTTTTCTCCTCGAAAGCAAACCGGATTTCCAAACGAAGCCTAGCAAGGTCTCCTTCGGCGTGCGAGAGAAGCCACGCGAATCAAGCGCCGTGGTGGCGAACTGCGACGAACTGGAGAGCGAAGAGTTCGAGTGCGAATCGATGCTCGACGAGGAAATCGAGGAAGGGATAGACAGCATCATGGGAAGCAGAGTGGAAGACGCTAATTGCCAAGCCTCGTGCCGCGGCGGCGAAGGAGTGACTCCGAGGTTTGGCATTGGCGGGAAATTCGGTTGGGTTAGGGCTCTCCGGCGAGTTGATGATAGCAACTGGTGGAATTTTCTGGTGGTTGATATGCTTCAAATCTCGCCGGGAATGAAGAAGGCTGCGCCAGCCGCTTTGGTTCCGGCGacggagaagaagaagaagaagaaggtggAGAAATTACCAGAGGTGGCACTGAGCCAGGGTTTGCTGTTGAAATTGAATTACGACGACGTTCGGGATGCTTGGTCGGACCGGGGGTCCCCGTTCGCCCATGGTTCGCCGGAAAATGACGTCGCCGTACGTTTCCCATCTCTCGCCGGCTATTTAAAATAA 645 0.5163 MEYINDSSEPLLLFREYNSDAFSFLLESKPDFQTKPSKVSFGVREKPRESSAVVANCDELESEEFECESMLDEEIEEGIDSIMGSRVEDANCQASCRGGEGVTPRFGIGGKFGWVRALRRVDDSNWWNFLVVDMLQISPGMKKAAPAALVPATEKKKKKKVEKLPEVALSQGLLLKLNYDDVRDAWSDRGSPFAHGSPENDVAVRFPSLAGYLK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1495 214 PANTHER - 3 211 - -
Ssu1g1495 214 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1495 Ssu-Chr1 34941295 34941939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1495 - - ccaj:109804447 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1495 1 34941295 34941939 Ssu1g1495 1 34941295 34941939 ECH
Ssu6g0695 6 10880570 10883257 Ssu1g1495 1 34941295 34941939 PCT