Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1486 ATGAGGTTGTGGGCGGAGTTTGGGTGTGTATTTATAGTAATTCTGTTTGGCCTCGCGCTGTTTGGGAAGGCAGAGATTTACATAGTAACCGTTGAGGGAGAGCCTATCGTAAGTTACAAGGGCGGGGTCGATGGGTTTGAAGCCACTGCGGTGGAATCTGATGATGACAAGGTTGATTCCACTAGTGAAGTGGTGGCTTCTTATGCTCGCCACCTTGAAAAGAGACATGACATGCTTCTGGGGATGCTGTTTGAGCGTGGGACATACAACAAGCTCTACAGCTATCGACATCTTATAAATGGGTTTGCTGTTCATCTTTCCCCAGAACAGGCAGAAACTCTTAGACATGCTCCTGGGGTGAAATCTGTTGAGAGGGACTGGAAGGTGAAGAGGCTCACTACACATACCCCACAATTTTTGGGGCTTCCAACTGGGGTATGGCCAACAGGAGGTGGCTACGAACGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATCTACCCTCACCACCCAAGCTTTACTACTTATAATACTGAACCATATGGGCCAGTTTCGAGATATAGAGGAAAATGTGAAGTTGATCCGGACACTAAAAGAAGTTTCTGTAATGGGAAAATTATTGGAGCACAACATTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGACTTTGCTTCGCCTCTGGATGGGGACGGGCATGGGAGTCATACAGCCTCTATTGCAGCTGGAAGAAATGGAATTCCTGTGAGGATGCATGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTCTTTGGAGGATTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTACATGATGGGGTGGATATACTCAGCCTTTCAGTTGGACCAAATAGTCCTCCATCAAACACCAAAACTACGTTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTAAAAGCTGGTGTGTTTGTCGCACAGGCTGCTGGAAATGGTGGTCCTTTCCCTAAGTCATTAGTTTCATATAGTCCATGGATAGCAACTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATCTGATCCTTGGAAATGGAAAAATCTTAGCTGGAATTGGATTGTCACCTTCTACACGTTTAAATCAAACATACACTTTGGTTGCTGCAAATGATGTGCTTCTGGATTCTTCGGTTATGAAGTACAGCCCTACTGATTGCCAGAGACCAGAAGTTTTAAATAAGAACTTAATAAAGGGAAATATTCTTCTCTGTGGCTATTCTTACAATTTTGTTATCGGTTCCGCATCAATAAAGAAAGTGTCAGAAACAGCAAAGGCCCTTGGAGCAGTTGGATTTGTTCTTTGTGTTGAAAATGTTTCTCCTGGAGCAAAATTTGATCCGGTCCCTGTTGGCCTTCCTGGGATTCTTATCACAGATGTCAGCAAGTCAAAGGAACTGATAGATTATTATAATACCTCCACACCAAGAGACTGGACTGGAAGGGTGAAGAGTTTCCAAGGTACTGGTAAAATTGGGGACGGTTTGATGCCTATTCTCTATAAATCTGCACCCCAAGTAGCATTGTTTTCTGCTAGAGGGCCAAATATAAAGGACTTTAGCTTCCTAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCGGGTTCATTGATTTGGGCTGCTTGGTCTCTAAATGGAACCGATGAGCCAAATTATGTTGGAGAGGGGTTTGCCATGATATCTGGGACTAGTATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACACTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGAAATCCTATTCTAGCACAGCAATATTCTGAAACAGAAGCTATTAAGCTGGTCAGAGCCACTCCTTTTGATTATGGGAGTGGACACGTTAATCCAAGAGCTGCCTTGGACCCTGGCCTCGTCTTTGATGCAGGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGCTCATGAGATAAAGAACTACACAAACTCGCCATGTAACAACACCATGGGCCACTCATCAAATTTAAACACTCCATCCATTACAGTTTCCCATCTTGTAAGAACTCAAATTGTCACACGCACTGTCACAAATGTTGCTGATGAGGAAGAAACCTATGTGATCACAGCTAGGATGCAACCAGCAGTTGCCATTGACGTGAACCCTCCAGCAATGACCATTAAAGCAGGTGCATCACGCAAGTTTTCTGTGACACTCACTGTTCGCTCAGTGACAGGAACCTATAGTTTTGGAGAGGTATTACTGAAGGGAAGCAGAGGGCACAAGGTGAGGATCCCTGTTCTGGCCAATGGATACTCAAGATAG 2466 0.4457 MRLWAEFGCVFIVILFGLALFGKAEIYIVTVEGEPIVSYKGGVDGFEATAVESDDDKVDSTSEVVASYARHLEKRHDMLLGMLFERGTYNKLYSYRHLINGFAVHLSPEQAETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGYERAGEDIVIGFVDSGIYPHHPSFTTYNTEPYGPVSRYRGKCEVDPDTKRSFCNGKIIGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGRNGIPVRMHGHEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPSNTKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKSLVSYSPWIATVAAAIDDRRYKNHLILGNGKILAGIGLSPSTRLNQTYTLVAANDVLLDSSVMKYSPTDCQRPEVLNKNLIKGNILLCGYSYNFVIGSASIKKVSETAKALGAVGFVLCVENVSPGAKFDPVPVGLPGILITDVSKSKELIDYYNTSTPRDWTGRVKSFQGTGKIGDGLMPILYKSAPQVALFSARGPNIKDFSFLEADLLKPDILAPGSLIWAAWSLNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPILAQQYSETEAIKLVRATPFDYGSGHVNPRAALDPGLVFDAGYEDYLGFLCTTPGIDAHEIKNYTNSPCNNTMGHSSNLNTPSITVSHLVRTQIVTRTVTNVADEEETYVITARMQPAVAIDVNPPAMTIKAGASRKFSVTLTVRSVTGTYSFGEVLLKGSRGHKVRIPVLANGYSR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1486 821 ProSiteProfiles Serine proteases, subtilase domain profile. 126 677 - -
Ssu1g1486 821 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 820 IPR045051 -
Ssu1g1486 821 Pfam Peptidase inhibitor I9 27 130 IPR010259 -
Ssu1g1486 821 SUPERFAMILY Protease propeptides/inhibitors 36 129 - -
Ssu1g1486 821 SUPERFAMILY Subtilisin-like 132 681 IPR036852 GO:0004252|GO:0006508
Ssu1g1486 821 ProSitePatterns Serine proteases, subtilase family, serine active site. 600 610 IPR023828 -
Ssu1g1486 821 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 131 IPR037045 -
Ssu1g1486 821 Gene3D - 694 818 - -
Ssu1g1486 821 PRINTS Subtilisin serine protease family (S8) signature 236 249 IPR015500 -
Ssu1g1486 821 PRINTS Subtilisin serine protease family (S8) signature 599 615 IPR015500 -
Ssu1g1486 821 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Ssu1g1486 821 CDD PA_subtilisin_like 379 517 - -
Ssu1g1486 821 PANTHER CUCUMISIN-RELATED 16 820 - -
Ssu1g1486 821 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 162 173 IPR023827 -
Ssu1g1486 821 Pfam Fibronectin type-III domain 722 815 IPR041469 -
Ssu1g1486 821 Gene3D - 372 537 - -
Ssu1g1486 821 Pfam Subtilase family 157 642 IPR000209 GO:0006508|GO:0008236
Ssu1g1486 821 CDD Peptidases_S8_3 133 636 IPR034197 -
Ssu1g1486 821 Gene3D Peptidase S8/S53 domain 159 690 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1486 Ssu-Chr1 34699878 34705874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1486 6 821 Subtilisin-like Serine Gene Family AT4G30020 80.416 0.0 1362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1486 - - gmx:100784999 1554.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1486 1 34699878 34705874 Ssu1g1486 1 34699878 34705874 ECH
Ssu6g0706 6 11027516 11034682 Ssu1g1486 1 34699878 34705874 PCT