Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1477 ATGGTGAATCACGTTTCAAActattctcttctctttataaTCTTTGCTTTGATTATAACAGGGCCAATAGAAGTAAAAGGAAATGTATGTTCACAAGCATTGGGTGCATGTGGTCCTTTAGGACAATGCGACCAGAGGTGTAAAGCACAACACACTGGTGGACAAGGTTCTTGTAACTTAAACTTGTGCACTTGCTACTACAAATGTGGGCCTCCAAGTCCAACCCCACCTAAAAAATGCAATGCTGGTCTTGGGCTTTGTAGTGCTCAGTGCAATGATCGTGCTGTAATTCAAAATGTGCAAGCAAATACAATCAGGTGTAGGGATGTGTAA 333 0.3964 MVNHVSNYSLLFIIFALIITGPIEVKGNVCSQALGACGPLGQCDQRCKAQHTGGQGSCNLNLCTCYYKCGPPSPTPPKKCNAGLGLCSAQCNDRAVIQNVQANTIRCRDV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1477 110 PANTHER DEFENSIN-LIKE PROTEIN 183 1 97 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1477 Ssu-Chr1 34580817 34581262 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1477 11 99 Plant Defensins Gene Families AT5G38330 38.298 1.99e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1477 - K17307 gsj:114386687 153.295