Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1474 ATGGTGAATCACGTTTCAAActattctcttctctttataaTCTTGGCTTTGATTATAACAGGCCCAATAGAAGTAAAAGGAAATGTATGTTCACAAGCATTAGGTGCATGTGGTCCTTTAGGGCAATGTGACCAGAGGTGTAAAGCACAACACAGTGGTGGACAAGGTTCTTGTGACTTAAACTTGTGCACTTGCTACTACAAATGTGGGCCTCCAACTCCAACCCCACCTAAAATATGCAATGCTGGACTTGGGCTTTGTAGTGCTCAGTGCAATGAAGCATGCTGTAATGCAAAATGTGCAAGCAAATACAATCACGGTGTAGGGATGTGTAACACCATTGCTACATACAACTTATGTAATTGTCAATATGTATGCGGCTGA 384 0.3984 MVNHVSNYSLLFIILALIITGPIEVKGNVCSQALGACGPLGQCDQRCKAQHSGGQGSCDLNLCTCYYKCGPPTPTPPKICNAGLGLCSAQCNEACCNAKCASKYNHGVGMCNTIATYNLCNCQYVCG 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1474 127 PANTHER DEFENSIN-LIKE PROTEIN 183 1 126 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1474 Ssu-Chr1 34539019 34539514 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1474 11 126 Plant Defensins Gene Families AT5G38330 42.975 8.14e-24 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1474 - - gsj:114386687 213.386