Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1459 ATGGAGGGTCAACCTGCCAAACGCAGACGTGTATACTCACTTGAACCCAACAAGGTGGAACAAGCAGCGTTTGCTAGAAACTACATGAACTATCTGGTTCCAGCATTGATGAAGATCAAGGAAAGAAGCTCTTCAGAACATAGTGGCCATTGTGATGTTCAGAATGTTGTTAAGTATGAAGTGGACATGGCAATGGTGTACTCAGCCCAGGGTTTTGCATGGAGCAATGCTTTAAGTCTCAAGCTTCAAAAGGACAGGGCCAATGTAGATAGTGACACTACTAGCTTTGGTGAAAACAATAAGGCTGGTGAAGGTTCATCAAGGATGTGTGGCCAGGTTTGTGAAATGGTGCCATTGGATCATTTCCCTTCAAACCCTAGTTTGAAGTCTAATAATAAGCAAAAGGACATGCCAGAAATGAAAAGGGGTTTAAGAGAAGAtggtgatgatgaagatgaggtCATCAATGGCCAGTTGAAGAGCCTAAGAAGGTTGATACCTGGGGGAGAAGAGATGTATAGTGAACAAATGCTGGCAGAGCTACAAAGCTATATAAGCTGTTTGCAAATGCAGGTGAACATTCTTCAGTGCCTCGCAGAGACACATTGA 609 0.4187 MEGQPAKRRRVYSLEPNKVEQAAFARNYMNYLVPALMKIKERSSSEHSGHCDVQNVVKYEVDMAMVYSAQGFAWSNALSLKLQKDRANVDSDTTSFGENNKAGEGSSRMCGQVCEMVPLDHFPSNPSLKSNNKQKDMPEMKRGLREDGDDEDEVINGQLKSLRRLIPGGEEMYSEQMLAELQSYISCLQMQVNILQCLAETH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1459 202 MobiDBLite consensus disorder prediction 124 150 - -
Ssu1g1459 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 201 IPR044660 GO:0006355
Ssu1g1459 202 MobiDBLite consensus disorder prediction 134 150 - -
Ssu1g1459 202 CDD bHLH_AtIBH1_like 144 199 IPR044549 GO:0006355
Ssu1g1459 202 PANTHER TRANSCRIPTION FACTOR BHLH146 3 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1459 Ssu-Chr1 33690292 33690900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1459 7 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 47.368 3.44e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1459 - - gmx:100805301 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0725 6 11414775 11415392 Ssu1g1459 1 33690292 33690900 PCT