Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1417 ATGGCTTCAACTGAAATTGATGAAGACGGTCATAACAGAGGCGGTATGTGGGTTTTGGATCAGAAGATTGACCAGCCAATGGATGAAGAAGCTGGAAGGCTCAAAAATATGTACAGAGAAAAAAAATTTTCTACACTGTTGCTTCTACGGCTTGCATATCAGAGTCTTGGTGTAGTTTATGGAGATTTGGGCACTTCCCCCTTATACGTTTTCTATAATACATTTCCTCATGGAATTAAAGATCAAGAGGATGTGATTGGAGCTCTTTCTTTGATTATATACTCTCTTACTCTGGTGCCGCTGCTCAAATATGTTCTTATTGTATTGAGAGCAAATGATAATGGTCAAGGTGGAACATTGGCTCTTTATTCCTTGCTCTGTCGACATGCAAACATTAAAACCATTCCCAATCAGCATCATACAGATGAAGAGCTAACAACATATAGTCGGTCTACCTTCCACGAAAAGTCATTTGCTGCAAAAACCAAGAGATGGTTAGAGAAACaagcttatataaaaaatatcattcttaTGCTCGCCCTTGTTGGTACCTGCATGGTGATTGGAGATGGTATTCTTACCCCAGCTATATCTGTTTTATCTGCTGTTGGTGGCATCAAGGTTAATCACGCTGATTTGAGTAACGGAGTAGTTGTGCTGGTTGCAGTTGTAATATTAGTTGGACTATTCAGCATGCAACATTATGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGAGGTATAGGTATGTTCAACATCTGCAAATATGACAGCAGCATTCTAAAAGCTTTTTCACCTGTTTATATATATCGGTATCTATTAAGAGGAGGTAAAGACGGTTGGACTTCCCTTGGTGGCATTTTGCTCAGCATAACAGGGACAGAGGCTCTTTTTGCTGACCTAGCCCACTTTCCAGTCTCTTCTGTACAGATTGCTTTTACTCTGCTTGTGTTTCCTTGCCTCCTTTTAGCCTACTCTGGACAGGCTGCTTACCTTATGCATAACTTGGATCATTCACAAGATGCGTTTTATCGCTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTGTTGCGACAGCAGCAGCTGTAGTCGCAAGCCAGGCCACAATATCTGCAACCTTTTCAATTATTAAGCAAGCCCTTGCTCATGGCTGTTTCCCAAGAGTAAAAGTTGTACATACATCAAAGAATTTCCTTGGCCAGATATATATTCCAGATATCAATTGGATCCTTATGATTCTATGCATTGCTGTTACTGCTGGGTTTAAAAATCAAAGTCAGATTGGAAATGCATATGGTACCGCAGTTGTGTTAGTCATGCTGGTTACAACACTGCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCACTGGATTCTGGTGGTGGGGTTCACTGGCTTATCATTGGTTGTGGAATGCACATACTTCTCTGCTGTACTCTTCAAAGTTGATCAAGGTGGGTGGGCTCCCCTTGTAATTGCTGGAACATTTCTTCTTATTATGTATGTTTGGCATTATGGTACGGTGAAACGCTACGAGTTTGAAATGCACAGTAAGGTCTCAATGTCATGGATTCTTGGGCTTGGACCAAGTTTAGGACTTGTTCGTGTCCCGGGAATTGGGCTGGTATACACAGAGCTTGCAAGTGGAGTACCCCACATCTTTTCTCATTTCATTACAAACCTACCAGCCATCCATtctgttgttgtttttgtatgTGTGAAATATCTTCCTGTCTACACTGTCCCAGAAGATGAAAGGTTCCTTGTCAAGCGGATCGGCCCGAAGAATTTCCACATGTTTCGATGCGTGGCGCGATACGGATACAAAGACCTGCATAAGAAAGATGATGATTTTGAGAAAAAGCTTTTCCATAACCTTTTTGTGTTTGTTAAGCTTGAGTCTATGATGGAGGAGTGCTCAGATTCAGATGACTACAGTTTATATGGACAGCAAACTGAGCAGTCAAGAGAAGGCCTATTGAATAATAATGGAAACACAGTTTCATTGAATATGGATCCAACAGTTTCATCAGTGGATTCAATAGTATCAGTTACATCTCCATCACAAGGGAATGTTACTGAGGTTGatgaaattgagtttttaaacAACTGCAGGGATGCTGGGGTGGTTCACATACTAGGAAACACAGTTGTGAGGGCCAGTAGGGATTCAAGATTCCACAAGAAAATAGCTgttgattatatatatgcatttctTAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCACGAGAGTCTCTTAAATGTTGGTCAGGTTTTCTATGTATAG 2340 0.3974 MASTEIDEDGHNRGGMWVLDQKIDQPMDEEAGRLKNMYREKKFSTLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGIKDQEDVIGALSLIIYSLTLVPLLKYVLIVLRANDNGQGGTLALYSLLCRHANIKTIPNQHHTDEELTTYSRSTFHEKSFAAKTKRWLEKQAYIKNIILMLALVGTCMVIGDGILTPAISVLSAVGGIKVNHADLSNGVVVLVAVVILVGLFSMQHYGTDRVGWLFAPIVLLWFLLIGGIGMFNICKYDSSILKAFSPVYIYRYLLRGGKDGWTSLGGILLSITGTEALFADLAHFPVSSVQIAFTLLVFPCLLLAYSGQAAYLMHNLDHSQDAFYRSIPDKIYWPVFVVATAAAVVASQATISATFSIIKQALAHGCFPRVKVVHTSKNFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWRCHWILVVGFTGLSLVVECTYFSAVLFKVDQGGWAPLVIAGTFLLIMYVWHYGTVKRYEFEMHSKVSMSWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFHNLFVFVKLESMMEECSDSDDYSLYGQQTEQSREGLLNNNGNTVSLNMDPTVSSVDSIVSVTSPSQGNVTEVDEIEFLNNCRDAGVVHILGNTVVRASRDSRFHKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQVFYV 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1417 779 PANTHER POTASSIUM TRANSPORTER 5 778 - -
Ssu1g1417 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 5 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu1g1417 779 Pfam K+ potassium transporter 53 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu1g1417 779 TIGRFAM kup: potassium uptake protein 51 779 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1417 Ssu-Chr1 31503180 31510719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1417 5 779 Inorganic Solute Cotransporters AT2G35060 78.900 0.0 1223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1417 K03549 - gmx:100801093 1400.96