Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1414 atggtgAGAGACATGATGGGCACATACTCATCATCAGGAGGGTGTGGTGGGGGAGACATGAATGAGAAACCTGCATGGCTAGAGAGGCTGATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCACGAGGATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCTCTTCCCACCGCTCTCATCCTCTCCTCCAGGTGCGAAGGTATGTTTACCACGACGTGATTCGATTAGATGATCTGGAAAAACTCATTGATTGTTCCAATATTCAGCCCTATACTATAAACAGCGCCAAAGTAATATTCTTAAATCAGAGGCCACAATCAAGGACATGCAAAGGTCCTGCCAACGCTTGCTTCACTTGTGACAGGATTCTTCAGGAGCCGTTTCATTTCTGTTCTCTATCATGCAAGGTTGCTTACATGGTGTACGCGGGTCAAAGCTTGTCCAGCATTTTACATCGATTCGATGAATCTGATTTTGCAATTTCGCAGTTCGAGGGTCTAAGAGTGGATGGCTCAGAGGTAATTGATGAAGATGCGCAAATTGCCCCTAGTTCCTCTTACTTCAACACTGAGGCCACTAGCAATTCCGTAATTTCATGCGAACCTAATAACAACGTGAAGAAGGGCAAGACCAGCAGGTTCCTCCCTGGGATCGTCCTCTCTCTTGGCAGCAGAAGAAAGGGTGCCCCCCATAGGGCCCCTCTCTCCTag 747 0.4793 MVRDMMGTYSSSGGCGGGDMNEKPAWLERLMAETFFGGCGVHEDRRKNEKNVFCLHCCLSICPHCLSSHRSHPLLQVRRYVYHDVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRTCKGPANACFTCDRILQEPFHFCSLSCKVAYMVYAGQSLSSILHRFDESDFAISQFEGLRVDGSEVIDEDAQIAPSSSYFNTEATSNSVISCEPNNNVKKGKTSRFLPGIVLSLGSRRKGAPHRAPLS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1414 248 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Ssu1g1414 248 PANTHER - 24 248 - -
Ssu1g1414 248 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 24 248 - -
Ssu1g1414 248 Pfam PLATZ transcription factor 78 149 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1414 Ssu-Chr1 31430280 31436631 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ssu1g1414 PLATZ 1.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1414 - - gmx:100806234 474.167