Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1381 ATGGAGATTTTACAATCAGAGGTTGGAAGTGGAGTTGAAGATTCCTGCAAACAGAGGTATTCTCTCGCTCTTGAAGATGTTGTTCAGAAAATCTACAATAAAATGGACCTGCTGCTGTTTGCCAATGAGGATGAAGCCCCAAATAGTTTACTCAACAGTGAGGACATCAACAAATCCTTGAACAAAAAGCATACAGAGATGAGAGTTTGGGCCCCAAAGCAGAAGGGTATGAAAACCAAGACAGATCTGCTTCAAAGGGTGCCAAAAAGGAAGGAGCGAAAAAGGGCAAGCTATGGCACCGTATGTGAGACCCCAATGACAGGAAATAAGTGTTCAAGCCCATGGTCAAGGGGTTCATATGATGACAATGGCCTGGCTGATGGGAGTCAACAAAGTGGCTCAGTTTCTAAGGGTATTagatatttgaaagattttaatattaaggAAGCGGCTGGTGGAGTTGGAAAGAGCATCAACTTTGAAAATCCTTCAAAAGGGCTGTCTACTGGAGCTATTGTTGGAATTGTTGCTGCATCATGGGGGCTTGTCATATCGATACTGGTTGGAAGATGGGTTTCATTGGTGGGAAAGATACAACAGACAAAGGGTGTGCTGTCAGATGGTGATGTGATTGCTGTAAAGCAGCTCTCCTCCAAATTGACGCAAGGGAACCGTGAATTTGTCAATGAAATTGGAATGATATCTGCTTTGCAGCATCCAAATCTGGTGAAGCTTTATGGCTGTTGCATTGAAATTTGA 759 0.4216 MEILQSEVGSGVEDSCKQRYSLALEDVVQKIYNKMDLLLFANEDEAPNSLLNSEDINKSLNKKHTEMRVWAPKQKGMKTKTDLLQRVPKRKERKRASYGTVCETPMTGNKCSSPWSRGSYDDNGLADGSQQSGSVSKGIRYLKDFNIKEAAGGVGKSINFENPSKGLSTGAIVGIVAASWGLVISILVGRWVSLVGKIQQTKGVLSDGDVIAVKQLSSKLTQGNREFVNEIGMISALQHPNLVKLYGCCIEI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1381 252 Gene3D Phosphorylase Kinase; domain 1 189 252 - -
Ssu1g1381 252 PANTHER BNAC01G36570D PROTEIN 203 251 - -
Ssu1g1381 252 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 203 251 - -
Ssu1g1381 252 Pfam Protein tyrosine and serine/threonine kinase 210 250 IPR001245 GO:0004672|GO:0006468
Ssu1g1381 252 SUPERFAMILY Protein kinase-like (PK-like) 202 251 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1381 Ssu-Chr1 30432588 30434800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1381 202 251 Receptor kinase-like Gene Family AT1G53430 88.000 6.30e-22 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu1g1381 PK_Tyr_Ser-Thr 1.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1381 - - gmx:100815226 138.658