Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1379 ATGCTCTTTGGTGGAACAGATTCATCAACCGGAACTTTAGAATGGTCATTATCTAATTTATTGAACCACCCAGAGGTTTTGAAGAAGGCAAGAGATGAATTGGACACTCAAGTAGGGCAAGGCCGGTTATTAAATGAGTCAGACCTTCCAAAACTTCCGTATCTTAGGAAGATCATCCTGGAGACACTGAGGTTGTATCCACCAGCTCCAGTGCTAATACCGCACGTGTCTTCGAAAGATATCACTATTGGAGGATTCAATGTCCCACGAGACACAATAGTGATAATTAACGGTTGGGCCATGCAAAGAGATCCTCAATTGTGGAATGATGCCACAAGCTTTAAACCTGAGAGGTTTGATGAAGAAGGTGAGGAAAAAAAGTTAGTAGCATTTGGGATGGGAAGAAGGGCTTGCCCAGGAGAAGCCATGGCTATGCAAAGCGTCAGCTTCACTTTGGGATTGTTGATTCAATGTTTTGACTGGAAACGAGTAAGTGATGAAAAACTTGATATGACAGAGAATAATTGGATTACCTTGTCAAGGTTAATTCCACTGGAGGCTATGTGTAAAGCCCGCCCACTCGCcaataaaattgaaagtttttaa 606 0.4158 MLFGGTDSSTGTLEWSLSNLLNHPEVLKKARDELDTQVGQGRLLNESDLPKLPYLRKIILETLRLYPPAPVLIPHVSSKDITIGGFNVPRDTIVIINGWAMQRDPQLWNDATSFKPERFDEEGEEKKLVAFGMGRRACPGEAMAMQSVSFTLGLLIQCFDWKRVSDEKLDMTENNWITLSRLIPLEAMCKARPLANKIESF 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1379 201 Pfam Cytochrome P450 1 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 SUPERFAMILY Cytochrome P450 1 192 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 197 - -
Ssu1g1379 201 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PRINTS E-class P450 group I signature 128 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PRINTS E-class P450 group I signature 138 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PRINTS P450 superfamily signature 138 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PRINTS P450 superfamily signature 129 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g1379 201 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 197 - -
Ssu1g1379 201 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 131 140 IPR017972 GO:0005506|GO:0016705
Ssu1g1379 201 Gene3D Cytochrome P450 1 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1379 Ssu-Chr1 30276742 30277347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1379 1 198 Cytochrome P450 AT4G37360 58.586 9.59e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1379 K13260 - gmx:100789410 384.8