Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu1g1304 | ATGGGTGAACATAACAATGGCCATGAACAACGAAGAAAGTTTGCCATTCTTGGCATCTCTTCAATCCTCCTTGTAGCTATGGTGGCTGCGGTGGCTGTTAGTTTAAACCATGGAAGTGGAACTAAAGGAGAAGAAGGGAATGACCATATCTATAGTGCTCAAAGGAACATAGACATGCTTTGCCAATCAACAGAATACCCAGAAACATGTAAGAAAAGCCTTAGGCAAGCATCTAACAAAACCACAGACACGAAGGAGCTCATCAAAGCCGCGATCAATGCCACGGCTGTGGAACTTTTAAATCACATAAACAACTCCACCCTTTATCGTGAGTTGGCCAAGGACAACATGACAAAACAAGCTATGGATATTTGTAAAGAAGTATTTGACTATGCAGTTGATGGTATTCACAAATCTGCTGAGACATTGGACAAGTTTGAATTTAACAAGTTGAGCGAATTTGTTTATGACCTCAAGGTTTGGTTAACGGGGAGTCTTTCTCACCAACAAACTTGCTTGGATGGTTTTGAGAATACAACCACAAAGGCTGGTGAGACAATGGCTAAGGTTATGAATACCTCTTTGGAGCTTAGTAGCAATGCATTGGATATGATCAATATGATATCTAGCTTATTCAAGGATCTTAACCAAAGCACAATTGGCAATAAGAGACTTCTCTCTGAGGAAGCAACACTTATGGATGGTTTTCCTTCATGGGTGAATGAAGGGCAACGACATCTTCTCCAAAGTGCTAGGCTTGGAAGTATTAAGCCCAATTTAGTCGTGGCTCTTGATGGGACTGGCCAATTTAAAACACTCACTGACGCTCTTAAGATTGTTCCCCCTAAGAATGCCCAAACTTTTGTGATTTATGTAAAAGCTGGTGTGTATAATGAAATTGTGAATGTGGCCAAGGAGATGACCCATGTCACAATTATTGGAGATGGTCCTACAAAGACTAGATTCACTGGTAATTTAAACTACGTCGATGGTGTCCAAACTTACAACACTGCTACCTTCGCTGTTAATGGTGCCAATTTCATGGCCAAGGATGTTGGATTTGAAAACACAGCAGGGTCCGAGAAACACCAAGCAGTAGCACTTCGAGTAACAGCAGACCAAGCTGTGTTTTATAATTGCCAAATGGACGGGTTCCAAGACACTCTTTATGCCCAATCCCAACGCCAATTCTACCGTGATTGCACCATTAGTGGCACCATCGACTTTATCTTTGGAGACGCCTTTGGAATGTTCCAAAACTGCAAACTGGTTGTGAGAAAACCCTTAGACAACCAACAGTGCATGGTGACGGCCGGTGGCAGAACCAAAGTTGACAGTCTTAGTGCCCTTGTGTTCCAAAGTTGCCACTTCACAGGGGAACCCCAAGTAGCTAACTTGAAACCCAAGATAGCATACCTTGGAAGGCCATGGAAGACATACTCTAAGGTGGTGATCATTGACTCTCAAATTGACAACATCTTTTTACCAGAAGGGTACATGGCATGGATGGGAAGTGCATTCAAGGACACATGTAcatattatgaatataataacaaGGGCCCTAGTGCTGATACATCATTTAGAGTTAAATGGCCAGGTGTTAAGACCATAACCTCTGCTGAAGCAACTAATTATTATCCTGGGAGGTTCTTTGAACTTGCTAATTCAACTGAACGTGATGCTTGGATTGTTGATGCTAGATATAAACTTGCATGTGAATATAGAGATATGGGCGGACATAACAATGACCATGAACAACAAAGAAGGCTTGCCATTCTTAGTATCTCTTCAATCCTCCTTGTGGCTATGGTGCCTGCGGCAATGGCTGTTGGTTTAAAACATGGAAGTGaaactaaaagagaaaagaatgacTTTAATATCTTAAACATTCCAAAGAGCAGTGGAGGCATGCTTTGCCAATTAACCCAGTACCAAGAAATCTGTAAGAAAAGCCTTGGGAATGAATTTTTCGTAACCACAGACCCAAAGAAGCTCATCAAAGCTGGGTTCAATGCCACGGTGGTGGAACTTTTAAACCACATAAACAACTCCACCCTTTATCGTGAGTTGGCCACAGATGACATGACAAGACAAGCTATGGATATTTGTACAGAAGTATTGGACTATGCGGTTGATGGTGTTATTAAATCTACTGAGATATTGGACAAGTTTGAATTTAACAAGTTGAATGAATATGTTTATGACCTCAAGGTTTGGCTCACGGGGAGTATTTCTCATCAACAAACTTGCTTGGAAGGTTTTGAGGATAAAGGAACACAGGTTGGTGAGACAATGGCTAAGGTTATGAATGCCTCTTTGGAGCTTAGTAGCAATGCGTTGGATATGACCAATATGATCTCTCACTTACTCAAGGGTCTTAACCTAAATAAATTTGGCAATAGGAGACTTCTCTCTGAGGAAGTAACACTTACGGATGGTTTCCTTTCGTGGGTGAATGAAGGGCAACGACGTTTTCTCCAGGCTTTTGGAAGTATTAAGCCCAATTCAATTGTGGCCCAAGATGGGTCCGGCCAATTTAAGACACTCACTGAAGCTCTTAAGACTGTTCCCCCTAAGAATGCTAAAACTTTTGTGATTTATGTCAAGGCTGGTGTGTATAAAGAAAATGTGAATGTCACCAAGGACATGACCCATGTCACAATTATTGGAGATGGTCCTACAAAGACTAAATTCACTGGCAATTTAAACTACGTTGATGGTGTCCCAACTTTCAACACTGCTACCTTTAGTGTTAATGGTGCCAACTTCATGGCCAAGGATGTTGGATTTGAAAACACAGCAGGGTCTGAGAAACAACAAGCAGTGGCACTTCTAGTCACAGCAGACCAATCTGTGTTCTATAATTGCCAAATAGACGGGTTCCAAGACACCCTTTATGCCCAATCCCAACGCCAATTCTACCGTGATTGTACCATCAGTGGCACTATCGACTTTATCTTTGGGGACGCCTTTGGAATGTTCCAAAACTGCACACTAATTGTAAGACCACCCTTACACGGACAACGGTGCATGGTGACAGCTGGTGGCAGAACCAAAGCTGATAGTCCCAGTGCCCTTGTGTTCCAAAGCTGCCACTTTACAGGGGAACCCCAAGTGGCTAGTGCAGAGCCTAAGATAGCATTCCTTGGAAGGCCATGGAGGCCATACTCTAAGGTGGTGATCATGGACTCTCAAATTGAGAATGTCTTTTTACTAGAAGGGTTCGAGGCATGGATGGGAAATGCATTCAAGGACACATGTACATATTATGAGTATAATAACAAAGGCCCTGGTGCTGACACATCACGTAGAGTTAAATGGCCAGGTGTTAAGACCATAACCTCTGATGAAGTAGCTAGTTATTATCCAGGGAAGTTCTTTGAACTCACTAATTCAACTGAACGTGATGCTTGGATTGTTAATGCTGGGATACCCTACTCTCTTGGCCCTATGAATGCCCAAAGTCCTACAACACTGGCCCAAAGTCCTATAGGGTGA | 3498 | 0.4214 | MGEHNNGHEQRRKFAILGISSILLVAMVAAVAVSLNHGSGTKGEEGNDHIYSAQRNIDMLCQSTEYPETCKKSLRQASNKTTDTKELIKAAINATAVELLNHINNSTLYRELAKDNMTKQAMDICKEVFDYAVDGIHKSAETLDKFEFNKLSEFVYDLKVWLTGSLSHQQTCLDGFENTTTKAGETMAKVMNTSLELSSNALDMINMISSLFKDLNQSTIGNKRLLSEEATLMDGFPSWVNEGQRHLLQSARLGSIKPNLVVALDGTGQFKTLTDALKIVPPKNAQTFVIYVKAGVYNEIVNVAKEMTHVTIIGDGPTKTRFTGNLNYVDGVQTYNTATFAVNGANFMAKDVGFENTAGSEKHQAVALRVTADQAVFYNCQMDGFQDTLYAQSQRQFYRDCTISGTIDFIFGDAFGMFQNCKLVVRKPLDNQQCMVTAGGRTKVDSLSALVFQSCHFTGEPQVANLKPKIAYLGRPWKTYSKVVIIDSQIDNIFLPEGYMAWMGSAFKDTCTYYEYNNKGPSADTSFRVKWPGVKTITSAEATNYYPGRFFELANSTERDAWIVDARYKLACEYRDMGGHNNDHEQQRRLAILSISSILLVAMVPAAMAVGLKHGSETKREKNDFNILNIPKSSGGMLCQLTQYQEICKKSLGNEFFVTTDPKKLIKAGFNATVVELLNHINNSTLYRELATDDMTRQAMDICTEVLDYAVDGVIKSTEILDKFEFNKLNEYVYDLKVWLTGSISHQQTCLEGFEDKGTQVGETMAKVMNASLELSSNALDMTNMISHLLKGLNLNKFGNRRLLSEEVTLTDGFLSWVNEGQRRFLQAFGSIKPNSIVAQDGSGQFKTLTEALKTVPPKNAKTFVIYVKAGVYKENVNVTKDMTHVTIIGDGPTKTKFTGNLNYVDGVPTFNTATFSVNGANFMAKDVGFENTAGSEKQQAVALLVTADQSVFYNCQIDGFQDTLYAQSQRQFYRDCTISGTIDFIFGDAFGMFQNCTLIVRPPLHGQRCMVTAGGRTKADSPSALVFQSCHFTGEPQVASAEPKIAFLGRPWRPYSKVVIMDSQIENVFLLEGFEAWMGNAFKDTCTYYEYNNKGPGADTSRRVKWPGVKTITSDEVASYYPGKFFELTNSTERDAWIVNAGIPYSLGPMNAQSPTTLAQSPIG | 1165 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu1g1304 | 1165 | PANTHER | PECTINESTERASE | 8 | 566 | - | - | |
| Ssu1g1304 | 1165 | PANTHER | PECTINESTERASE | 583 | 1153 | - | - | |
| Ssu1g1304 | 1165 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 638 | 786 | IPR006501 | GO:0004857 | |
| Ssu1g1304 | 1165 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 53 | 208 | IPR006501 | GO:0004857 | |
| Ssu1g1304 | 1165 | ProSitePatterns | Pectinesterase signature 1. | 284 | 303 | IPR018040 | - | |
| Ssu1g1304 | 1165 | ProSitePatterns | Pectinesterase signature 2. | 403 | 412 | IPR033131 | - | |
| Ssu1g1304 | 1165 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 637 | 787 | IPR035513 | - | |
| Ssu1g1304 | 1165 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 52 | 209 | IPR035513 | - | |
| Ssu1g1304 | 1165 | SMART | PMEI_2 | 52 | 204 | IPR006501 | GO:0004857 | |
| Ssu1g1304 | 1165 | SMART | PMEI_2 | 630 | 782 | IPR006501 | GO:0004857 |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes