Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1289 ATGGTTCTTTTTCCATCTCTTGTCAATGGATTGGCAAGAACTGTGTCGTTGAAGAAAGACAAGAGTGGTAGAAAGGGAAACGATGGTGGAAGGAAAGCTGTGGAAGCATTGGCAAAGGAAGCAAGGAAGAATGAATTGTTACTGACTTCAACTGGAATTGTTAAGTCTTCCAAGGCCAACAATGTTGCCTCTGTGTTCACTAAGAATGGCCAGAAAGGATTCAATCAGGACAGCCTTATTGTTTGGGAGGTATGCCAACGTAACAATAGGGGACTTTTAATGCCCTTTTCAGCATGA 297 0.4242 MVLFPSLVNGLARTVSLKKDKSGRKGNDGGRKAVEALAKEARKNELLLTSTGIVKSSKANNVASVFTKNGQKGFNQDSLIVWEVCQRNNRGLLMPFSA 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1289 98 PANTHER ALPHABET, ISOFORM E-RELATED 1 84 - -
Ssu1g1289 98 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1289 Ssu-Chr1 28352644 28352940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1289 4 83 PP2C-type Phosphatase Gene Family AT3G05640 45.000 4.59e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1289 - - gmx:100814087 117.857