Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1155 ATGAAGAGGTTCTACAGGCAGAGAAAAAATGCTACTAACAAATCTTCTAAATCAAGGAAGAAATCTAAAGTTGTCGCGGAGCGTCTCGATGATGGCTACAGTTTGGAAGAGAAGAATTTGAGGGAATTTGACATGGACATGACATATGGACCCTGCCTTGGATTGACAAGATTAGAACGCTGGGAGCGTGCACACAAATTGGGTTTGAATCCTCCACAACAACTTAAGTGTCTTTTGCAAAGTGACAAAGTTCGATCAGAATGCTTGTGGTATAAGTATACGTAG 285 0.4105 MKRFYRQRKNATNKSSKSRKKSKVVAERLDDGYSLEEKNLREFDMDMTYGPCLGLTRLERWERAHKLGLNPPQQLKCLLQSDKVRSECLWYKYT 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1155 94 MobiDBLite consensus disorder prediction 1 24 - -
Ssu1g1155 94 MobiDBLite consensus disorder prediction 1 19 - -
Ssu1g1155 94 Pfam DNA polymerase delta, subunit 4 9 83 IPR007218 GO:0000731|GO:0006260
Ssu1g1155 94 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 8 93 IPR007218 GO:0000731|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1155 Ssu-Chr1 25472160 25472528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1155 1 90 Core DNA Replication Machinery Family AT1G09815 43.363 1.05e-27 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1155 K03505 - pvy:116134558 95.1301