Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1099 ATGAAATTTGTAGCGAGGGTCTACCTCACACTGTGCCTTGCCTCGTCCATTGTCATTATGATGGCCACAACACAAAGAACGAGGTATTTGTTTGGCACTAATAAATACTATGTGCGAGTGATCAATGGGTTCACGGACAATTCCTCTGTGCCTTTGGTGATTTGGTGCTCTTCAGAGGAGATGGATCTTGGAGGGCGTGCCTTGCAAGAGCACGATGACTTCAGCTGGGTGATGAGGCCAAACTTTTGGGGCAGCAACCGCATGAAGTGCACCATGAAATGGGACAACACGAGGAAGAGCTTTGAGGCCTTTCGGGCCTCCAGAGACACTGACCGGTGTGGACCTAATAGGATGTGCTCTTGGATGGTAACTCAAGATGGGTTTTATTTCAGCAATGATGAGGTGAATTGGAGGAAGGACTTCTTGtggtga 432 0.4769 MKFVARVYLTLCLASSIVIMMATTQRTRYLFGTNKYYVRVINGFTDNSSVPLVIWCSSEEMDLGGRALQEHDDFSWVMRPNFWGSNRMKCTMKWDNTRKSFEAFRASRDTDRCGPNRMCSWMVTQDGFYFSNDEVNWRKDFLW 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1099 143 Pfam Plant self-incompatibility protein S1 38 143 IPR010264 -
Ssu1g1099 143 PANTHER - 7 143 IPR010264 -
Ssu1g1099 143 PANTHER BNAA01G23250D PROTEIN 7 143 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1099 50 127 Carbohydrate Esterase AT3G16970 30.488 4.85e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1099 - - gmx:100792052 281.567