Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1094 ATGAGCTCTCTCAGTGTCTTCACAGTGAAAGTAGCTCTGTGCAGTGTGGTGTTTATGCTTGGAGCATCACTACCCTTCTCAGATGCACAACTAGATCCTTCGTTTTACAGAGACACGTGTCCAAAAGTGCATTCACTTGTGCGTGAGGTTGTCAGAAATGTTTCCAAATCCGATCCCCGAATTCTTGCCAGTCTCATAAGGCTCCACTTTCATGATTGTTTCGTTCAAAGTGATCAAGAATTGTTTAACACAAGTGGTGCAGATACCATTGCCATTGTCAATAGTTTCAGCAATAACCAAACTCTTTTCTACGAAAACTTTAAGGCGTCAATGATAAAAATGAGCATCATTGGGGCGCTAACAGGATCACAAGGAGAAATTCGAGCACAGTGTAATTTCGTGAATGGGAATTCTTCAAGTCTTGCTACTTTAGCCACCAAAGAATCAACAGATGATGGTATGGTGAGCTCGATTTAA 477 0.4151 MSSLSVFTVKVALCSVVFMLGASLPFSDAQLDPSFYRDTCPKVHSLVREVVRNVSKSDPRILASLIRLHFHDCFVQSDQELFNTSGADTIAIVNSFSNNQTLFYENFKASMIKMSIIGALTGSQGEIRAQCNFVNGNSSSLATLATKESTDDGMVSSI 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1094 158 PANTHER PEROXIDASE 75 143 - -
Ssu1g1094 158 Gene3D - 35 76 - -
Ssu1g1094 158 ProSiteProfiles Plant heme peroxidase family profile. 30 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1094 158 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1094 158 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1094 158 SUPERFAMILY Heme-dependent peroxidases 75 135 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu1g1094 158 PANTHER PEROXIDASE 9 75 - -
Ssu1g1094 158 PANTHER PEROXIDASE 72-RELATED 9 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1094 158 PANTHER PEROXIDASE 72-RELATED 75 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1094 158 Gene3D Peroxidase, domain 2 77 114 - -
Ssu1g1094 158 ProSiteProfiles Plant heme peroxidase family profile. 78 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1094 158 Gene3D - 115 135 - -
Ssu1g1094 158 SUPERFAMILY Heme-dependent peroxidases 14 75 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1094 Ssu-Chr1 23545398 23549001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1094 27 75 Peroxidase AT5G06730 55.102 5.10e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1094 K00430 - gmx:112997600 140.584