Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1092 atgaggtctTTCCGTGTCACGGTGACAGCTCTGTGCTGTgcaatggttgtgcttggagttCTACCACTCTCCCTAGATGCACAACTTGATCCTTCGTTTTACAGAAAGACTTGTCCCAACGTTCACTCCATTGTTCTCCAAGTCGTGAGCAGCGTTGCACAGAAAGATCCCCGCATGCTCGCCAGTCTCGTTAGACTTCACTTTCATGACTGTTTTGTTCAAGGCTGTGACGCATCAATTTTGTTGAACAACACTGCCACGATAGTGAGTGAGCAGCAAGCTTTGCCCAACAACAACTCAATAAGAGGTTTGGATGTTGTGAACCAAATCAAGACAGCAGTGGAAAATATTTGCCCCGGCGTGGTTTCTTGTGCTGATATTCTTACCCTTGCTGCTGAAATTTCTTCTGTTCTGGCTGGTGGTCCTTGCTGGAAAGTTCCCTTGGGACGAAGGGATAGTTTAACAGCAAACCGAACCCTTGCCAATCAAAACCTTCCTGCTCCTTTCTTCAACCTGACTCAACTTAAAGCCGCCTTTAAAGTTCAAGGTCTCAACACTACTGATCTAGTAGCACTCTCAGACACCATCAGCATTGTCAACAAGTTCAGTAGCGACCAAAAAGCTTTCTTTGACAGCTTTGTGGCTTCAATGATTAAAATGGGTAATATTGGTGTGCTAACTGGGACCAAAGGAGAAATCAGAAAACAATGTAATTTTGTTAACAAGAAATCTGCTGAACTTGATATTGCTGGCGTGGCCTCCAAAGAATCATCAGCGGAGGGTGGTCAATCCATAATACAAAAGGGTGCAATGGGATTTCAAGACTTAGAGGAAGATCGAAATCCTGAGACAAAAAAGTTACATGATATGTTGGTAATTTCACAACCTCCACAATGGGATGGGATAGGATGGAAGTGA 918 0.4259 MRSFRVTVTALCCAMVVLGVLPLSLDAQLDPSFYRKTCPNVHSIVLQVVSSVAQKDPRMLASLVRLHFHDCFVQGCDASILLNNTATIVSEQQALPNNNSIRGLDVVNQIKTAVENICPGVVSCADILTLAAEISSVLAGGPCWKVPLGRRDSLTANRTLANQNLPAPFFNLTQLKAAFKVQGLNTTDLVALSDTISIVNKFSSDQKAFFDSFVASMIKMGNIGVLTGTKGEIRKQCNFVNKKSAELDIAGVASKESSAEGGQSIIQKGAMGFQDLEEDRNPETKKLHDMLVISQPPQWDGIGWK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1092 305 Gene3D - 32 165 - -
Ssu1g1092 305 Gene3D Peroxidase, domain 2 196 220 - -
Ssu1g1092 305 ProSiteProfiles Plant heme peroxidase family profile. 199 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PANTHER PEROXIDASE 72-RELATED 193 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 Pfam Peroxidase 47 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 SUPERFAMILY Heme-dependent peroxidases 28 241 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 PANTHER PEROXIDASE FAMILY PROTEIN 7 193 - -
Ssu1g1092 305 Gene3D - 221 241 - -
Ssu1g1092 305 ProSiteProfiles Plant heme peroxidase family profile. 28 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 CDD secretory_peroxidase 28 240 IPR033905 GO:0004601|GO:0042744
Ssu1g1092 305 PANTHER PEROXIDASE FAMILY PROTEIN 193 252 - -
Ssu1g1092 305 PANTHER PEROXIDASE 72-RELATED 7 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1092 305 Gene3D Peroxidase, domain 2 166 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1092 Ssu-Chr1 23415129 23420268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1092 193 243 Peroxidase AT2G38380 52.941 2.14e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1092 K00430 - gmx:547499 333.569